Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.64□□□□□ -0.23
GDNFP39905 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GDNFP39905 AC127383.1-201ENST00000444697 1800 ntBASIC13.64□□□□□ -0.23
GDNFP39905 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
GDNFP39905 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.64□□□□□ -0.23
GDNFP39905 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.64□□□□□ -0.23
GDNFP39905 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.64□□□□□ -0.23
GDNFP39905 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
GDNFP39905 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 AC010327.5-201ENST00000586923 3061 ntBASIC13.64□□□□□ -0.23
GDNFP39905 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
GDNFP39905 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.64□□□□□ -0.23
GDNFP39905 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.64□□□□□ -0.23
GDNFP39905 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
GDNFP39905 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
GDNFP39905 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.64□□□□□ -0.23
GDNFP39905 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.64□□□□□ -0.23
GDNFP39905 AC023274.1-201ENST00000418278 595 ntBASIC13.64□□□□□ -0.23
GDNFP39905 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.64□□□□□ -0.23
GDNFP39905 POLD2P1-201ENST00000511220 997 ntBASIC13.64□□□□□ -0.23
GDNFP39905 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.64□□□□□ -0.23
GDNFP39905 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.64□□□□□ -0.23
GDNFP39905 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.64□□□□□ -0.23
GDNFP39905 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 AL671883.3-201ENST00000603274 991 ntBASIC13.64□□□□□ -0.23
GDNFP39905 FAM197Y3-203ENST00000618346 717 ntBASIC13.64□□□□□ -0.23
GDNFP39905 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GDNFP39905 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GDNFP39905 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GDNFP39905 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
GDNFP39905 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
GDNFP39905 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
GDNFP39905 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.63□□□□□ -0.23
GDNFP39905 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GDNFP39905 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.63□□□□□ -0.23
GDNFP39905 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.63□□□□□ -0.23
GDNFP39905 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
GDNFP39905 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 INTS4P1-203ENST00000641008 3683 ntBASIC13.63□□□□□ -0.23
GDNFP39905 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.63□□□□□ -0.23
GDNFP39905 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.63□□□□□ -0.23
GDNFP39905 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 MIR574-201ENST00000385209 96 ntBASIC13.63□□□□□ -0.23
GDNFP39905 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.63□□□□□ -0.23
GDNFP39905 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
GDNFP39905 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.63□□□□□ -0.23
GDNFP39905 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
GDNFP39905 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
GDNFP39905 PTENP1-202ENST00000532280 3996 ntBASIC13.63□□□□□ -0.23
GDNFP39905 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
GDNFP39905 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
GDNFP39905 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
GDNFP39905 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms