Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.47■□□□□ 0.71
COL15A1P39059 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.47■□□□□ 0.71
COL15A1P39059 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL15A1P39059 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL15A1P39059 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
COL15A1P39059 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
COL15A1P39059 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.46■□□□□ 0.71
COL15A1P39059 NKAIN1P1-201ENST00000435754 582 ntBASIC19.46■□□□□ 0.71
COL15A1P39059 SDHD-202ENST00000525291 790 ntTSL 3 BASIC19.46■□□□□ 0.71
COL15A1P39059 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.46■□□□□ 0.71
COL15A1P39059 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
COL15A1P39059 AC091812.3-201ENST00000621362 345 ntBASIC19.46■□□□□ 0.71
COL15A1P39059 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
COL15A1P39059 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.46■□□□□ 0.71
COL15A1P39059 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.46■□□□□ 0.71
COL15A1P39059 KRT8P19-201ENST00000551916 1455 ntBASIC19.46■□□□□ 0.71
COL15A1P39059 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.46■□□□□ 0.71
COL15A1P39059 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.46■□□□□ 0.71
COL15A1P39059 AC127383.1-201ENST00000444697 1800 ntBASIC19.46■□□□□ 0.71
COL15A1P39059 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL15A1P39059 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.46■□□□□ 0.71
COL15A1P39059 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL15A1P39059 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
COL15A1P39059 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
COL15A1P39059 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 SDCCAG3P2-201ENST00000326105 1023 ntBASIC19.45■□□□□ 0.7
COL15A1P39059 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 SMS-201ENST00000379404 1174 ntTSL 3 BASIC19.45■□□□□ 0.7
COL15A1P39059 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL15A1P39059 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.45■□□□□ 0.7
COL15A1P39059 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC19.45■□□□□ 0.7
COL15A1P39059 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.45■□□□□ 0.7
COL15A1P39059 KRTAP19-9P-201ENST00000421795 191 ntBASIC19.45■□□□□ 0.7
COL15A1P39059 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.45■□□□□ 0.7
COL15A1P39059 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC19.45■□□□□ 0.7
COL15A1P39059 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC19.45■□□□□ 0.7
COL15A1P39059 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.45■□□□□ 0.7
COL15A1P39059 AL391280.1-201ENST00000506969 1062 ntBASIC19.45■□□□□ 0.7
COL15A1P39059 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.45■□□□□ 0.7
COL15A1P39059 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC19.45■□□□□ 0.7
COL15A1P39059 ZACNP1-201ENST00000612259 710 ntBASIC19.45■□□□□ 0.7
COL15A1P39059 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.45■□□□□ 0.7
COL15A1P39059 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.45■□□□□ 0.7
COL15A1P39059 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC19.45■□□□□ 0.7
COL15A1P39059 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
COL15A1P39059 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.45■□□□□ 0.7
COL15A1P39059 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC19.45■□□□□ 0.7
COL15A1P39059 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
COL15A1P39059 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.45■□□□□ 0.7
COL15A1P39059 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.45■□□□□ 0.7
COL15A1P39059 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.45■□□□□ 0.7
COL15A1P39059 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL15A1P39059 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC19.44■□□□□ 0.7
COL15A1P39059 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL15A1P39059 HIST2H2BB-201ENST00000449108 381 ntBASIC19.44■□□□□ 0.7
COL15A1P39059 ATP6V0CP2-201ENST00000469409 207 ntBASIC19.44■□□□□ 0.7
COL15A1P39059 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC19.44■□□□□ 0.7
COL15A1P39059 AC106820.3-201ENST00000561653 397 ntBASIC19.44■□□□□ 0.7
COL15A1P39059 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC19.44■□□□□ 0.7
COL15A1P39059 INO80C-210ENST00000590757 595 ntTSL 2 BASIC19.44■□□□□ 0.7
COL15A1P39059 DIO1-215ENST00000610607 796 ntTSL 5 BASIC19.44■□□□□ 0.7
COL15A1P39059 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
COL15A1P39059 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms