Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PTPN6P29350 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 AC084364.1-201ENST00000551967 1556 ntBASIC14.81□□□□□ -0.04
PTPN6P29350 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PTPN6P29350 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 AC126755.1-201ENST00000525846 6405 ntBASIC14.81□□□□□ -0.04
PTPN6P29350 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PTPN6P29350 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.8□□□□□ -0.04
PTPN6P29350 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 AC232323.1-201ENST00000540724 2099 ntBASIC14.8□□□□□ -0.04
PTPN6P29350 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 REXO1L5P-201ENST00000622260 2098 ntBASIC14.8□□□□□ -0.04
PTPN6P29350 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.8□□□□□ -0.04
PTPN6P29350 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PTPN6P29350 HMGN1P19-201ENST00000436976 333 ntBASIC14.8□□□□□ -0.04
PTPN6P29350 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.8□□□□□ -0.04
PTPN6P29350 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PTPN6P29350 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.8□□□□□ -0.04
PTPN6P29350 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.8□□□□□ -0.04
PTPN6P29350 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PTPN6P29350 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PTPN6P29350 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
PTPN6P29350 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PTPN6P29350 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN6P29350 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
PTPN6P29350 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PTPN6P29350 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PTPN6P29350 MIR770-201ENST00000390219 98 ntBASIC14.79□□□□□ -0.04
PTPN6P29350 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.79□□□□□ -0.04
PTPN6P29350 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN6P29350 MIR943-201ENST00000401286 94 ntBASIC14.79□□□□□ -0.04
PTPN6P29350 RPL5P21-201ENST00000404620 815 ntBASIC14.79□□□□□ -0.04
PTPN6P29350 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PTPN6P29350 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN6P29350 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN6P29350 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.79□□□□□ -0.04
PTPN6P29350 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN6P29350 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.79□□□□□ -0.04
PTPN6P29350 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.79□□□□□ -0.04
PTPN6P29350 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.79□□□□□ -0.04
PTPN6P29350 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.79□□□□□ -0.04
PTPN6P29350 AC105021.1-202ENST00000570572 669 ntBASIC14.79□□□□□ -0.04
PTPN6P29350 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.79□□□□□ -0.04
PTPN6P29350 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.79□□□□□ -0.04
PTPN6P29350 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
PTPN6P29350 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms