Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARSP26640 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.41■□□□□ 0.06
VARSP26640 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARSP26640 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARSP26640 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARSP26640 AC087481.3-201ENST00000602886 1894 ntBASIC15.41■□□□□ 0.06
VARSP26640 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
VARSP26640 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARSP26640 AL109954.1-202ENST00000564051 2148 ntBASIC15.41■□□□□ 0.06
VARSP26640 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.41■□□□□ 0.06
VARSP26640 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARSP26640 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARSP26640 KRT8P37-201ENST00000451609 1420 ntBASIC15.41■□□□□ 0.06
VARSP26640 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.41■□□□□ 0.06
VARSP26640 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.41■□□□□ 0.06
VARSP26640 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC15.41■□□□□ 0.06
VARSP26640 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
VARSP26640 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARSP26640 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARSP26640 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
VARSP26640 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.4■□□□□ 0.06
VARSP26640 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
VARSP26640 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.4■□□□□ 0.06
VARSP26640 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 GRK6P1-201ENST00000400595 1711 ntBASIC15.4■□□□□ 0.06
VARSP26640 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
VARSP26640 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
VARSP26640 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.4■□□□□ 0.06
VARSP26640 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
VARSP26640 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
VARSP26640 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
VARSP26640 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
VARSP26640 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.4■□□□□ 0.06
VARSP26640 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.4■□□□□ 0.06
VARSP26640 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.4■□□□□ 0.06
VARSP26640 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.4■□□□□ 0.06
VARSP26640 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.4■□□□□ 0.06
VARSP26640 AC069120.2-201ENST00000524091 540 ntBASIC15.4■□□□□ 0.06
VARSP26640 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.4■□□□□ 0.06
VARSP26640 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.4■□□□□ 0.06
VARSP26640 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.4■□□□□ 0.06
VARSP26640 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.4■□□□□ 0.06
VARSP26640 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.4■□□□□ 0.06
VARSP26640 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 AC007967.4-201ENST00000614700 386 ntBASIC15.4■□□□□ 0.06
VARSP26640 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.4■□□□□ 0.06
VARSP26640 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.4■□□□□ 0.06
VARSP26640 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
VARSP26640 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
VARSP26640 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.4■□□□□ 0.06
VARSP26640 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.4■□□□□ 0.06
VARSP26640 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
VARSP26640 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
VARSP26640 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.4■□□□□ 0.06
VARSP26640 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VARSP26640 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
VARSP26640 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
VARSP26640 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARSP26640 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.39■□□□□ 0.05
VARSP26640 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
VARSP26640 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VARSP26640 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARSP26640 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.39■□□□□ 0.05
VARSP26640 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARSP26640 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.39■□□□□ 0.05
VARSP26640 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARSP26640 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARSP26640 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VARSP26640 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VARSP26640 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.39■□□□□ 0.05
VARSP26640 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARSP26640 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.39■□□□□ 0.05
VARSP26640 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.39■□□□□ 0.05
VARSP26640 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.39■□□□□ 0.05
VARSP26640 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
VARSP26640 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
VARSP26640 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.39■□□□□ 0.05
VARSP26640 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.39■□□□□ 0.05
VARSP26640 RN7SL828P-201ENST00000607615 303 ntBASIC15.39■□□□□ 0.05
VARSP26640 AL133215.2-201ENST00000609242 977 ntBASIC15.39■□□□□ 0.05
VARSP26640 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
VARSP26640 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms