Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC14.91□□□□□ -0.02
LAMA1P25391 DPM3-202ENST00000368399 517 ntBASIC14.91□□□□□ -0.02
LAMA1P25391 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.91□□□□□ -0.02
LAMA1P25391 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC14.91□□□□□ -0.02
LAMA1P25391 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.91□□□□□ -0.02
LAMA1P25391 AC006335.1-201ENST00000445200 547 ntBASIC14.91□□□□□ -0.02
LAMA1P25391 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
LAMA1P25391 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.91□□□□□ -0.02
LAMA1P25391 DNM1P30-201ENST00000563586 452 ntBASIC14.91□□□□□ -0.02
LAMA1P25391 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.91□□□□□ -0.02
LAMA1P25391 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.91□□□□□ -0.02
LAMA1P25391 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LAMA1P25391 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.91□□□□□ -0.02
LAMA1P25391 LINC02447-202ENST00000501888 2146 ntBASIC14.9□□□□□ -0.02
LAMA1P25391 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.9□□□□□ -0.02
LAMA1P25391 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 LRRC59-203ENST00000576448 1531 ntBASIC14.9□□□□□ -0.02
LAMA1P25391 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 AC132192.2-201ENST00000596206 1147 ntBASIC14.9□□□□□ -0.02
LAMA1P25391 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 AC055811.4-201ENST00000624039 1754 ntBASIC14.9□□□□□ -0.02
LAMA1P25391 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.9□□□□□ -0.02
LAMA1P25391 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
LAMA1P25391 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LAMA1P25391 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.9□□□□□ -0.02
LAMA1P25391 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.9□□□□□ -0.02
LAMA1P25391 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.9□□□□□ -0.02
LAMA1P25391 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.9□□□□□ -0.02
LAMA1P25391 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
LAMA1P25391 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LAMA1P25391 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.9□□□□□ -0.02
LAMA1P25391 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LAMA1P25391 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LAMA1P25391 AC015909.3-201ENST00000572855 1794 ntBASIC14.89□□□□□ -0.03
LAMA1P25391 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LAMA1P25391 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 NPM1P43-201ENST00000558669 786 ntBASIC14.89□□□□□ -0.03
LAMA1P25391 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LAMA1P25391 AL023803.2-201ENST00000620080 638 ntBASIC14.89□□□□□ -0.03
LAMA1P25391 AL805961.1-201ENST00000642026 753 ntBASIC14.89□□□□□ -0.03
LAMA1P25391 PCDHA1-201ENST00000378133 2726 ntBASIC14.89□□□□□ -0.03
LAMA1P25391 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.89□□□□□ -0.03
LAMA1P25391 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.89□□□□□ -0.03
LAMA1P25391 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.89□□□□□ -0.03
LAMA1P25391 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LAMA1P25391 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.89□□□□□ -0.03
LAMA1P25391 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.89□□□□□ -0.03
LAMA1P25391 DNAJB1P1-201ENST00000429417 1024 ntBASIC14.89□□□□□ -0.03
LAMA1P25391 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LAMA1P25391 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.89□□□□□ -0.03
LAMA1P25391 AC005324.6-201ENST00000587972 613 ntBASIC14.89□□□□□ -0.03
LAMA1P25391 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC14.89□□□□□ -0.03
LAMA1P25391 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC14.89□□□□□ -0.03
LAMA1P25391 AL162426.1-201ENST00000624141 743 ntBASIC14.89□□□□□ -0.03
LAMA1P25391 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.89□□□□□ -0.03
LAMA1P25391 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LAMA1P25391 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LAMA1P25391 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.89□□□□□ -0.03
LAMA1P25391 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 AC141586.1-203ENST00000567242 366 ntBASIC14.89□□□□□ -0.03
LAMA1P25391 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LAMA1P25391 AC051619.9-201ENST00000623237 597 ntBASIC14.89□□□□□ -0.03
LAMA1P25391 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms