Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.38□□□□□ -0.27
TNFSF4P23510 PIN1P1-201ENST00000412108 996 ntBASIC13.38□□□□□ -0.27
TNFSF4P23510 DFFBP1-201ENST00000433250 979 ntBASIC13.38□□□□□ -0.27
TNFSF4P23510 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.38□□□□□ -0.27
TNFSF4P23510 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.38□□□□□ -0.27
TNFSF4P23510 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.38□□□□□ -0.27
TNFSF4P23510 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.38□□□□□ -0.27
TNFSF4P23510 AC055876.2-201ENST00000531834 546 ntBASIC13.38□□□□□ -0.27
TNFSF4P23510 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 AC036164.1-201ENST00000570544 333 ntBASIC13.38□□□□□ -0.27
TNFSF4P23510 RN7SL204P-201ENST00000582831 262 ntBASIC13.38□□□□□ -0.27
TNFSF4P23510 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.38□□□□□ -0.27
TNFSF4P23510 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TNFSF4P23510 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.38□□□□□ -0.27
TNFSF4P23510 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TNFSF4P23510 AGK-211ENST00000629555 2765 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
TNFSF4P23510 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 AC022188.1-201ENST00000620960 1664 ntBASIC13.37□□□□□ -0.27
TNFSF4P23510 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
TNFSF4P23510 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 AP005117.1-202ENST00000581724 1908 ntBASIC13.37□□□□□ -0.27
TNFSF4P23510 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.37□□□□□ -0.27
TNFSF4P23510 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.37□□□□□ -0.27
TNFSF4P23510 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 AL365203.3-201ENST00000609742 2057 ntBASIC13.37□□□□□ -0.27
TNFSF4P23510 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 RPL13P2-201ENST00000440687 659 ntBASIC13.37□□□□□ -0.27
TNFSF4P23510 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.37□□□□□ -0.27
TNFSF4P23510 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC13.37□□□□□ -0.27
TNFSF4P23510 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.37□□□□□ -0.27
TNFSF4P23510 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 AC104596.2-201ENST00000512793 793 ntBASIC13.37□□□□□ -0.27
TNFSF4P23510 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.37□□□□□ -0.27
TNFSF4P23510 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.37□□□□□ -0.27
TNFSF4P23510 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC13.37□□□□□ -0.27
TNFSF4P23510 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 COQ6-210ENST00000554920 649 ntTSL 3 BASIC13.37□□□□□ -0.27
TNFSF4P23510 MIR4313-201ENST00000580760 101 ntBASIC13.37□□□□□ -0.27
TNFSF4P23510 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.37□□□□□ -0.27
TNFSF4P23510 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 LINC01115-203ENST00000606068 577 ntBASIC13.37□□□□□ -0.27
TNFSF4P23510 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.37□□□□□ -0.27
TNFSF4P23510 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.37□□□□□ -0.27
TNFSF4P23510 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.37□□□□□ -0.27
TNFSF4P23510 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.37□□□□□ -0.27
TNFSF4P23510 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.37□□□□□ -0.27
TNFSF4P23510 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
TNFSF4P23510 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.37□□□□□ -0.27
TNFSF4P23510 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
TNFSF4P23510 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
TNFSF4P23510 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms