Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RFX1P22670 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX1P22670 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.97■□□□□ 0.31
RFX1P22670 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
RFX1P22670 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX1P22670 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.97■□□□□ 0.31
RFX1P22670 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.97■□□□□ 0.31
RFX1P22670 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 GNAQP1-201ENST00000444815 1067 ntBASIC16.97■□□□□ 0.31
RFX1P22670 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.97■□□□□ 0.31
RFX1P22670 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.97■□□□□ 0.31
RFX1P22670 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.97■□□□□ 0.31
RFX1P22670 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC16.97■□□□□ 0.31
RFX1P22670 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.97■□□□□ 0.31
RFX1P22670 AC104794.3-201ENST00000566840 1248 ntBASIC16.97■□□□□ 0.31
RFX1P22670 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC16.97■□□□□ 0.31
RFX1P22670 AC008494.3-201ENST00000606615 944 ntBASIC16.97■□□□□ 0.31
RFX1P22670 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.97■□□□□ 0.31
RFX1P22670 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
RFX1P22670 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RFX1P22670 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RFX1P22670 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
RFX1P22670 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFX1P22670 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RFX1P22670 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX1P22670 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX1P22670 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX1P22670 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RFX1P22670 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
RFX1P22670 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX1P22670 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX1P22670 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 AC103702.1-201ENST00000548801 2630 ntBASIC16.96■□□□□ 0.31
RFX1P22670 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX1P22670 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RFX1P22670 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
RFX1P22670 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX1P22670 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX1P22670 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX1P22670 AC234783.1-201ENST00000441761 496 ntBASIC16.96■□□□□ 0.31
RFX1P22670 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX1P22670 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
RFX1P22670 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX1P22670 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.96■□□□□ 0.31
RFX1P22670 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.96■□□□□ 0.31
RFX1P22670 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RFX1P22670 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.96■□□□□ 0.31
RFX1P22670 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX1P22670 AC009407.1-201ENST00000568958 598 ntBASIC16.96■□□□□ 0.31
RFX1P22670 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX1P22670 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RFX1P22670 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RFX1P22670 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX1P22670 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
RFX1P22670 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.96■□□□□ 0.31
RFX1P22670 MIR6069-201ENST00000620069 79 ntBASIC16.96■□□□□ 0.31
RFX1P22670 AC007431.3-201ENST00000623221 587 ntBASIC16.96■□□□□ 0.31
RFX1P22670 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFX1P22670 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
RFX1P22670 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RFX1P22670 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX1P22670 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.96■□□□□ 0.31
RFX1P22670 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFX1P22670 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.96■□□□□ 0.3
RFX1P22670 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.96■□□□□ 0.3
RFX1P22670 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RFX1P22670 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.95■□□□□ 0.3
RFX1P22670 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFX1P22670 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms