Protein–RNA interactions for Protein: P20248

CCNA2, Cyclin-A2, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2P20248 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
CCNA2P20248 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.79□□□□□ -0.04
CCNA2P20248 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.79□□□□□ -0.04
CCNA2P20248 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.79□□□□□ -0.04
CCNA2P20248 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.79□□□□□ -0.04
CCNA2P20248 DNAJB3-201ENST00000446806 729 ntBASIC14.79□□□□□ -0.04
CCNA2P20248 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCNA2P20248 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.79□□□□□ -0.04
CCNA2P20248 AC112482.1-201ENST00000492080 688 ntBASIC14.79□□□□□ -0.04
CCNA2P20248 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CCNA2P20248 AC079140.1-201ENST00000508039 487 ntBASIC14.79□□□□□ -0.04
CCNA2P20248 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.79□□□□□ -0.04
CCNA2P20248 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.79□□□□□ -0.04
CCNA2P20248 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 PTENP1-202ENST00000532280 3996 ntBASIC14.79□□□□□ -0.04
CCNA2P20248 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.79□□□□□ -0.04
CCNA2P20248 AC243562.1-201ENST00000560672 389 ntBASIC14.79□□□□□ -0.04
CCNA2P20248 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
CCNA2P20248 MIR4469-201ENST00000583919 79 ntBASIC14.79□□□□□ -0.04
CCNA2P20248 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.79□□□□□ -0.04
CCNA2P20248 UXT-AS1-201ENST00000590504 1525 ntBASIC14.79□□□□□ -0.04
CCNA2P20248 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.79□□□□□ -0.04
CCNA2P20248 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.79□□□□□ -0.04
CCNA2P20248 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.79□□□□□ -0.04
CCNA2P20248 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
CCNA2P20248 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCNA2P20248 AC126335.2-201ENST00000623362 4637 ntBASIC14.79□□□□□ -0.04
CCNA2P20248 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.79□□□□□ -0.04
CCNA2P20248 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.79□□□□□ -0.04
CCNA2P20248 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
CCNA2P20248 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.79□□□□□ -0.04
CCNA2P20248 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCNA2P20248 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
CCNA2P20248 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCNA2P20248 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCNA2P20248 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.78□□□□□ -0.04
CCNA2P20248 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CCNA2P20248 AC010327.5-201ENST00000586923 3061 ntBASIC14.78□□□□□ -0.04
CCNA2P20248 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC14.78□□□□□ -0.04
CCNA2P20248 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 AL589702.1-201ENST00000641229 1509 ntBASIC14.78□□□□□ -0.04
CCNA2P20248 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.78□□□□□ -0.04
CCNA2P20248 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
CCNA2P20248 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.78□□□□□ -0.04
CCNA2P20248 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.78□□□□□ -0.04
CCNA2P20248 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.78□□□□□ -0.04
CCNA2P20248 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.78□□□□□ -0.04
CCNA2P20248 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
CCNA2P20248 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.78□□□□□ -0.04
CCNA2P20248 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.78□□□□□ -0.04
CCNA2P20248 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CCNA2P20248 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.78□□□□□ -0.04
CCNA2P20248 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.78□□□□□ -0.04
CCNA2P20248 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms