Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.73■□□□□ 0.11
VCLP18206 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.73■□□□□ 0.11
VCLP18206 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
VCLP18206 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.73■□□□□ 0.11
VCLP18206 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.73■□□□□ 0.11
VCLP18206 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
VCLP18206 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
VCLP18206 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.73■□□□□ 0.11
VCLP18206 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
VCLP18206 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.73■□□□□ 0.11
VCLP18206 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.73■□□□□ 0.11
VCLP18206 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 FAM8A3P-201ENST00000427218 844 ntBASIC15.73■□□□□ 0.11
VCLP18206 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.73■□□□□ 0.11
VCLP18206 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.73■□□□□ 0.11
VCLP18206 AC004890.2-204ENST00000481968 304 ntBASIC15.73■□□□□ 0.11
VCLP18206 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.73■□□□□ 0.11
VCLP18206 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.73■□□□□ 0.11
VCLP18206 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.73■□□□□ 0.11
VCLP18206 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.73■□□□□ 0.11
VCLP18206 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC15.73■□□□□ 0.11
VCLP18206 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.73■□□□□ 0.11
VCLP18206 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.73■□□□□ 0.11
VCLP18206 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.73■□□□□ 0.11
VCLP18206 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
VCLP18206 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
VCLP18206 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
VCLP18206 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
VCLP18206 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
VCLP18206 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
VCLP18206 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.72■□□□□ 0.11
VCLP18206 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.72■□□□□ 0.11
VCLP18206 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.72■□□□□ 0.11
VCLP18206 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.72■□□□□ 0.11
VCLP18206 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.72■□□□□ 0.11
VCLP18206 TSSK5P-201ENST00000423978 907 ntBASIC15.72■□□□□ 0.11
VCLP18206 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.72■□□□□ 0.11
VCLP18206 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.72■□□□□ 0.11
VCLP18206 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.72■□□□□ 0.11
VCLP18206 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.72■□□□□ 0.11
VCLP18206 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.72■□□□□ 0.11
VCLP18206 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.72■□□□□ 0.11
VCLP18206 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.72■□□□□ 0.11
VCLP18206 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 AC007292.2-201ENST00000593524 1812 ntBASIC15.72■□□□□ 0.11
VCLP18206 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.72■□□□□ 0.11
VCLP18206 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.72■□□□□ 0.11
VCLP18206 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.72■□□□□ 0.11
VCLP18206 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
VCLP18206 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
VCLP18206 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
VCLP18206 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
VCLP18206 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.72■□□□□ 0.11
VCLP18206 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
VCLP18206 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.72■□□□□ 0.11
VCLP18206 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
VCLP18206 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
VCLP18206 BTBD7P1-201ENST00000447253 1453 ntBASIC15.71■□□□□ 0.11
VCLP18206 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.71■□□□□ 0.11
VCLP18206 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.71■□□□□ 0.11
VCLP18206 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.71■□□□□ 0.11
VCLP18206 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.71■□□□□ 0.11
VCLP18206 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
VCLP18206 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
VCLP18206 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VCLP18206 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.71■□□□□ 0.11
VCLP18206 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms