Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.99□□□□□ -0.17
HLA-DOBP13765 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
HLA-DOBP13765 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 KRT8P44-201ENST00000441609 1350 ntBASIC13.98□□□□□ -0.17
HLA-DOBP13765 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 AC067930.6-201ENST00000623257 4947 ntBASIC13.98□□□□□ -0.17
HLA-DOBP13765 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.98□□□□□ -0.17
HLA-DOBP13765 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 AC015922.1-201ENST00000421102 1152 ntBASIC13.98□□□□□ -0.17
HLA-DOBP13765 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 AC009477.1-201ENST00000452936 217 ntBASIC13.98□□□□□ -0.17
HLA-DOBP13765 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 RFPL4AP1-201ENST00000530883 850 ntBASIC13.98□□□□□ -0.17
HLA-DOBP13765 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 AC004461.2-201ENST00000629517 803 ntBASIC13.98□□□□□ -0.17
HLA-DOBP13765 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 AC023024.2-201ENST00000623561 1993 ntBASIC13.98□□□□□ -0.17
HLA-DOBP13765 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
HLA-DOBP13765 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
HLA-DOBP13765 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 CICP11-201ENST00000434745 2827 ntBASIC13.97□□□□□ -0.17
HLA-DOBP13765 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 TNRC18P2-201ENST00000417666 2714 ntBASIC13.97□□□□□ -0.17
HLA-DOBP13765 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 AC004890.2-204ENST00000481968 304 ntBASIC13.97□□□□□ -0.17
HLA-DOBP13765 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 ZNF890P-202ENST00000530367 1156 ntBASIC13.97□□□□□ -0.17
HLA-DOBP13765 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
HLA-DOBP13765 AC005498.2-205ENST00000593218 784 ntBASIC13.97□□□□□ -0.17
HLA-DOBP13765 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
HLA-DOBP13765 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms