Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AL022344.2-201ENST00000568976 968 ntBASIC25.86■■□□□ 1.73
CFTRP13569 AL132780.4-201ENST00000624870 1135 ntBASIC25.86■■□□□ 1.73
CFTRP13569 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CFTRP13569 ABR-203ENST00000536794 2213 ntTSL 2 BASIC25.86■■□□□ 1.73
CFTRP13569 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CFTRP13569 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
CFTRP13569 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CFTRP13569 AL137783.1-201ENST00000623494 1896 ntBASIC25.86■■□□□ 1.73
CFTRP13569 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CFTRP13569 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
CFTRP13569 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC25.86■■□□□ 1.73
CFTRP13569 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC25.85■■□□□ 1.73
CFTRP13569 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC25.85■■□□□ 1.73
CFTRP13569 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC25.85■■□□□ 1.73
CFTRP13569 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CFTRP13569 AL157792.1-201ENST00000488281 530 ntBASIC25.85■■□□□ 1.73
CFTRP13569 AC008723.1-201ENST00000506922 207 ntBASIC25.85■■□□□ 1.73
CFTRP13569 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC25.85■■□□□ 1.73
CFTRP13569 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC25.85■■□□□ 1.73
CFTRP13569 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC25.85■■□□□ 1.73
CFTRP13569 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
CFTRP13569 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC25.85■■□□□ 1.73
CFTRP13569 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC25.85■■□□□ 1.73
CFTRP13569 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
CFTRP13569 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC25.85■■□□□ 1.73
CFTRP13569 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC25.85■■□□□ 1.73
CFTRP13569 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
CFTRP13569 AL357563.1-201ENST00000404728 395 ntBASIC25.85■■□□□ 1.73
CFTRP13569 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 AC026410.1-201ENST00000507366 1101 ntBASIC25.85■■□□□ 1.73
CFTRP13569 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC25.85■■□□□ 1.73
CFTRP13569 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC25.85■■□□□ 1.73
CFTRP13569 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC25.85■■□□□ 1.73
CFTRP13569 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
CFTRP13569 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFTRP13569 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
CFTRP13569 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC25.84■■□□□ 1.73
CFTRP13569 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CFTRP13569 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC25.84■■□□□ 1.73
CFTRP13569 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC25.84■■□□□ 1.73
CFTRP13569 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC25.84■■□□□ 1.73
CFTRP13569 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CFTRP13569 EML3-212ENST00000494176 2901 ntTSL 2 BASIC25.84■■□□□ 1.73
CFTRP13569 EML3-216ENST00000529309 2909 ntTSL 2 BASIC25.84■■□□□ 1.73
CFTRP13569 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CFTRP13569 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC25.84■■□□□ 1.73
CFTRP13569 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC25.84■■□□□ 1.73
CFTRP13569 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CFTRP13569 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC25.84■■□□□ 1.73
CFTRP13569 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC25.84■■□□□ 1.73
CFTRP13569 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CFTRP13569 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
CFTRP13569 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
CFTRP13569 ORAOV1P1-201ENST00000503108 395 ntBASIC25.84■■□□□ 1.73
CFTRP13569 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC25.84■■□□□ 1.73
CFTRP13569 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC25.84■■□□□ 1.73
CFTRP13569 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
CFTRP13569 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CFTRP13569 AC073911.3-201ENST00000624401 631 ntBASIC25.84■■□□□ 1.73
CFTRP13569 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CFTRP13569 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CFTRP13569 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC25.83■■□□□ 1.73
CFTRP13569 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFTRP13569 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC25.83■■□□□ 1.73
CFTRP13569 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFTRP13569 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC25.83■■□□□ 1.73
CFTRP13569 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFTRP13569 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFTRP13569 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CFTRP13569 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CFTRP13569 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFTRP13569 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC25.83■■□□□ 1.73
CFTRP13569 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC25.83■■□□□ 1.73
CFTRP13569 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC25.83■■□□□ 1.73
CFTRP13569 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFTRP13569 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC25.83■■□□□ 1.73
CFTRP13569 MRPL22P1-201ENST00000505398 616 ntBASIC25.83■■□□□ 1.73
CFTRP13569 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
CFTRP13569 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
CFTRP13569 DDX5-235ENST00000630471 473 ntTSL 4 BASIC25.83■■□□□ 1.73
CFTRP13569 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFTRP13569 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFTRP13569 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC25.83■■□□□ 1.72
CFTRP13569 AC144522.1-201ENST00000625111 1658 ntBASIC25.83■■□□□ 1.72
CFTRP13569 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CFTRP13569 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
CFTRP13569 AC003102.2-201ENST00000589195 1469 ntBASIC25.82■■□□□ 1.72
CFTRP13569 STK26-204ENST00000481105 1835 ntTSL 2 BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms