Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.75□□□□□ -0.37
DEFA4P12838 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC12.75□□□□□ -0.37
DEFA4P12838 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.75□□□□□ -0.37
DEFA4P12838 GATB-205ENST00000508611 605 ntTSL 2 BASIC12.75□□□□□ -0.37
DEFA4P12838 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.75□□□□□ -0.37
DEFA4P12838 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 AP001282.1-201ENST00000531301 1499 ntBASIC12.75□□□□□ -0.37
DEFA4P12838 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.75□□□□□ -0.37
DEFA4P12838 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
DEFA4P12838 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
DEFA4P12838 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 MTDHP5-201ENST00000598980 586 ntBASIC12.75□□□□□ -0.37
DEFA4P12838 ZEB1-AS1-208ENST00000607166 2503 ntBASIC12.75□□□□□ -0.37
DEFA4P12838 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.75□□□□□ -0.37
DEFA4P12838 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.75□□□□□ -0.37
DEFA4P12838 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.75□□□□□ -0.37
DEFA4P12838 AC008267.7-201ENST00000624570 1194 ntBASIC12.75□□□□□ -0.37
DEFA4P12838 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
DEFA4P12838 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.75□□□□□ -0.37
DEFA4P12838 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
DEFA4P12838 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
DEFA4P12838 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.74□□□□□ -0.37
DEFA4P12838 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.74□□□□□ -0.37
DEFA4P12838 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.74□□□□□ -0.37
DEFA4P12838 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
DEFA4P12838 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 LINC00552-201ENST00000625151 2579 ntBASIC12.74□□□□□ -0.37
DEFA4P12838 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
DEFA4P12838 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.74□□□□□ -0.37
DEFA4P12838 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.74□□□□□ -0.37
DEFA4P12838 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 ACTG1P14-201ENST00000446382 1122 ntBASIC12.74□□□□□ -0.37
DEFA4P12838 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 TIMM8BP1-201ENST00000452384 211 ntBASIC12.74□□□□□ -0.37
DEFA4P12838 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC12.74□□□□□ -0.37
DEFA4P12838 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 MDH2-205ENST00000461263 648 ntTSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
DEFA4P12838 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.74□□□□□ -0.37
DEFA4P12838 POLD2P1-201ENST00000511220 997 ntBASIC12.74□□□□□ -0.37
DEFA4P12838 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC12.74□□□□□ -0.37
DEFA4P12838 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.74□□□□□ -0.37
DEFA4P12838 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.74□□□□□ -0.37
DEFA4P12838 AL138918.1-201ENST00000568306 659 ntBASIC12.74□□□□□ -0.37
DEFA4P12838 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.74□□□□□ -0.37
DEFA4P12838 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.74□□□□□ -0.37
DEFA4P12838 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 AC090616.6-203ENST00000579186 1945 ntBASIC12.74□□□□□ -0.37
DEFA4P12838 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.74□□□□□ -0.37
DEFA4P12838 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
DEFA4P12838 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
DEFA4P12838 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.73□□□□□ -0.37
DEFA4P12838 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
DEFA4P12838 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
DEFA4P12838 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms