Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
UBCP0CG48 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 TIMM8BP1-201ENST00000452384 211 ntBASIC13.73□□□□□ -0.21
UBCP0CG48 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.73□□□□□ -0.21
UBCP0CG48 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.73□□□□□ -0.21
UBCP0CG48 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.73□□□□□ -0.21
UBCP0CG48 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.73□□□□□ -0.21
UBCP0CG48 KRT8P48-201ENST00000515599 1220 ntBASIC13.73□□□□□ -0.21
UBCP0CG48 SLC25A1P1-201ENST00000528351 927 ntBASIC13.73□□□□□ -0.21
UBCP0CG48 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
UBCP0CG48 LINC01225-203ENST00000563550 1244 ntBASIC13.73□□□□□ -0.21
UBCP0CG48 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.73□□□□□ -0.21
UBCP0CG48 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.73□□□□□ -0.21
UBCP0CG48 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.73□□□□□ -0.21
UBCP0CG48 AC055717.3-201ENST00000622967 595 ntBASIC13.73□□□□□ -0.21
UBCP0CG48 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
UBCP0CG48 AC084121.4-201ENST00000641598 221 ntBASIC13.73□□□□□ -0.21
UBCP0CG48 AF228730.8-201ENST00000642140 221 ntBASIC13.73□□□□□ -0.21
UBCP0CG48 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
UBCP0CG48 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 AC138969.2-201ENST00000532739 9932 ntBASIC13.73□□□□□ -0.21
UBCP0CG48 UXT-AS1-201ENST00000590504 1525 ntBASIC13.73□□□□□ -0.21
UBCP0CG48 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
UBCP0CG48 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.73□□□□□ -0.21
UBCP0CG48 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
UBCP0CG48 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
UBCP0CG48 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
UBCP0CG48 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
UBCP0CG48 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
UBCP0CG48 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.72□□□□□ -0.21
UBCP0CG48 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
UBCP0CG48 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
UBCP0CG48 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
UBCP0CG48 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
UBCP0CG48 AP3S2-216ENST00000617003 1561 ntBASIC13.72□□□□□ -0.21
UBCP0CG48 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
UBCP0CG48 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
UBCP0CG48 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
UBCP0CG48 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
UBCP0CG48 YBX2P1-201ENST00000394192 760 ntBASIC13.72□□□□□ -0.21
UBCP0CG48 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.72□□□□□ -0.21
UBCP0CG48 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.72□□□□□ -0.21
UBCP0CG48 RARRES2P9-201ENST00000565168 469 ntBASIC13.72□□□□□ -0.21
UBCP0CG48 AC040169.1-201ENST00000565382 521 ntBASIC13.72□□□□□ -0.21
UBCP0CG48 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.72□□□□□ -0.21
UBCP0CG48 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.72□□□□□ -0.21
UBCP0CG48 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.72□□□□□ -0.21
UBCP0CG48 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC13.72□□□□□ -0.21
UBCP0CG48 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.72□□□□□ -0.21
UBCP0CG48 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.72□□□□□ -0.21
UBCP0CG48 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.72□□□□□ -0.21
UBCP0CG48 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
UBCP0CG48 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.71□□□□□ -0.21
UBCP0CG48 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.71□□□□□ -0.21
UBCP0CG48 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBCP0CG48 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.71□□□□□ -0.21
UBCP0CG48 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms