Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 FGD5P1-202ENST00000614866 2498 ntBASIC17.25■□□□□ 0.35
TPM1P09493 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM1P09493 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM1P09493 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
TPM1P09493 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TPM1P09493 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM1P09493 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TPM1P09493 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM1P09493 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TPM1P09493 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM1P09493 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TPM1P09493 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 AC004870.1-201ENST00000315132 882 ntBASIC17.24■□□□□ 0.35
TPM1P09493 RPS8P6-201ENST00000426177 609 ntBASIC17.24■□□□□ 0.35
TPM1P09493 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.24■□□□□ 0.35
TPM1P09493 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TPM1P09493 KRT18P56-201ENST00000507275 550 ntBASIC17.24■□□□□ 0.35
TPM1P09493 AC112191.1-201ENST00000523689 701 ntBASIC17.24■□□□□ 0.35
TPM1P09493 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM1P09493 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.24■□□□□ 0.35
TPM1P09493 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
TPM1P09493 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.24■□□□□ 0.35
TPM1P09493 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TPM1P09493 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.24■□□□□ 0.35
TPM1P09493 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TPM1P09493 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC17.24■□□□□ 0.35
TPM1P09493 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TPM1P09493 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TPM1P09493 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM1P09493 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM1P09493 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.24■□□□□ 0.35
TPM1P09493 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.24■□□□□ 0.35
TPM1P09493 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TPM1P09493 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TPM1P09493 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TPM1P09493 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.24■□□□□ 0.35
TPM1P09493 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TPM1P09493 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.23■□□□□ 0.35
TPM1P09493 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TPM1P09493 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 KRT8P37-201ENST00000451609 1420 ntBASIC17.23■□□□□ 0.35
TPM1P09493 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC17.23■□□□□ 0.35
TPM1P09493 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TPM1P09493 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TPM1P09493 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.23■□□□□ 0.35
TPM1P09493 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
TPM1P09493 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
TPM1P09493 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.23■□□□□ 0.35
TPM1P09493 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.23■□□□□ 0.35
TPM1P09493 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.23■□□□□ 0.35
TPM1P09493 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.23■□□□□ 0.35
TPM1P09493 AC079781.3-201ENST00000449110 356 ntBASIC17.23■□□□□ 0.35
TPM1P09493 PHKG1P2-201ENST00000457537 863 ntBASIC17.23■□□□□ 0.35
TPM1P09493 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.23■□□□□ 0.35
TPM1P09493 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.23■□□□□ 0.35
TPM1P09493 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.23■□□□□ 0.35
TPM1P09493 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 Z83851.2-201ENST00000609564 659 ntBASIC17.23■□□□□ 0.35
TPM1P09493 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TPM1P09493 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.23■□□□□ 0.35
TPM1P09493 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TPM1P09493 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
TPM1P09493 ADAMTS7P1-201ENST00000613213 4793 ntBASIC17.23■□□□□ 0.35
TPM1P09493 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TPM1P09493 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms