Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.89□□□□□ -0.19
ERCC1P07992 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ERCC1P07992 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.89□□□□□ -0.19
ERCC1P07992 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ERCC1P07992 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ERCC1P07992 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ERCC1P07992 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ERCC1P07992 MTND6P24-201ENST00000440466 518 ntBASIC13.89□□□□□ -0.19
ERCC1P07992 TERF1P3-201ENST00000505638 1227 ntBASIC13.89□□□□□ -0.19
ERCC1P07992 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.89□□□□□ -0.19
ERCC1P07992 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.89□□□□□ -0.19
ERCC1P07992 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.89□□□□□ -0.19
ERCC1P07992 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ERCC1P07992 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC13.89□□□□□ -0.19
ERCC1P07992 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.89□□□□□ -0.19
ERCC1P07992 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.89□□□□□ -0.19
ERCC1P07992 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.89□□□□□ -0.19
ERCC1P07992 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.89□□□□□ -0.19
ERCC1P07992 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.89□□□□□ -0.19
ERCC1P07992 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
ERCC1P07992 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
ERCC1P07992 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.89□□□□□ -0.19
ERCC1P07992 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ERCC1P07992 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.89□□□□□ -0.19
ERCC1P07992 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
ERCC1P07992 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
ERCC1P07992 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
ERCC1P07992 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ERCC1P07992 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
ERCC1P07992 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.88□□□□□ -0.19
ERCC1P07992 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.88□□□□□ -0.19
ERCC1P07992 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.88□□□□□ -0.19
ERCC1P07992 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
ERCC1P07992 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
ERCC1P07992 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
ERCC1P07992 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.88□□□□□ -0.19
ERCC1P07992 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
ERCC1P07992 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.88□□□□□ -0.19
ERCC1P07992 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
ERCC1P07992 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 HLA-V-204ENST00000476601 1289 ntBASIC13.88□□□□□ -0.19
ERCC1P07992 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.88□□□□□ -0.19
ERCC1P07992 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 LINC02084-201ENST00000606069 1096 ntBASIC13.88□□□□□ -0.19
ERCC1P07992 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ERCC1P07992 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
ERCC1P07992 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
ERCC1P07992 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.88□□□□□ -0.19
ERCC1P07992 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
ERCC1P07992 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
ERCC1P07992 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
ERCC1P07992 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms