Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC12.98□□□□□ -0.33
CTSDP07339 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.98□□□□□ -0.33
CTSDP07339 AC006504.5-208ENST00000588784 2401 ntBASIC12.98□□□□□ -0.33
CTSDP07339 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CTSDP07339 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.98□□□□□ -0.33
CTSDP07339 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.98□□□□□ -0.33
CTSDP07339 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.98□□□□□ -0.33
CTSDP07339 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.98□□□□□ -0.33
CTSDP07339 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CTSDP07339 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC12.98□□□□□ -0.33
CTSDP07339 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
CTSDP07339 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.98□□□□□ -0.33
CTSDP07339 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.98□□□□□ -0.33
CTSDP07339 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.98□□□□□ -0.33
CTSDP07339 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.98□□□□□ -0.33
CTSDP07339 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 AC084364.1-201ENST00000551967 1556 ntBASIC12.98□□□□□ -0.33
CTSDP07339 CYP4F24P-201ENST00000586049 1580 ntBASIC12.98□□□□□ -0.33
CTSDP07339 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CTSDP07339 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CTSDP07339 HSPA7-201ENST00000445535 1927 ntBASIC12.98□□□□□ -0.33
CTSDP07339 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CTSDP07339 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.97□□□□□ -0.33
CTSDP07339 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.97□□□□□ -0.33
CTSDP07339 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.97□□□□□ -0.33
CTSDP07339 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC12.97□□□□□ -0.33
CTSDP07339 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 AC005840.4-201ENST00000541242 2494 ntBASIC12.97□□□□□ -0.33
CTSDP07339 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.97□□□□□ -0.33
CTSDP07339 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSDP07339 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.97□□□□□ -0.33
CTSDP07339 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSDP07339 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
CTSDP07339 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSDP07339 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CTSDP07339 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.97□□□□□ -0.33
CTSDP07339 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
CTSDP07339 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CTSDP07339 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC12.97□□□□□ -0.33
CTSDP07339 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.97□□□□□ -0.33
CTSDP07339 AL121894.2-201ENST00000602977 491 ntBASIC12.97□□□□□ -0.33
CTSDP07339 AC104692.2-201ENST00000603054 253 ntBASIC12.97□□□□□ -0.33
CTSDP07339 FAM215A-202ENST00000632077 792 ntBASIC12.97□□□□□ -0.33
CTSDP07339 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSDP07339 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSDP07339 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CTSDP07339 BEND3P1-201ENST00000421591 1944 ntBASIC12.97□□□□□ -0.33
CTSDP07339 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
CTSDP07339 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSDP07339 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CTSDP07339 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.97□□□□□ -0.33
CTSDP07339 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms