Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CD3DP04234 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.27□□□□□ -0.29
CD3DP04234 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CD3DP04234 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CD3DP04234 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.27□□□□□ -0.29
CD3DP04234 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CD3DP04234 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CD3DP04234 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
CD3DP04234 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.26□□□□□ -0.29
CD3DP04234 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CD3DP04234 AC004987.2-201ENST00000395959 1148 ntBASIC13.26□□□□□ -0.29
CD3DP04234 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.26□□□□□ -0.29
CD3DP04234 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CD3DP04234 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 REXO1L2P-201ENST00000425429 2069 ntBASIC13.26□□□□□ -0.29
CD3DP04234 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.26□□□□□ -0.29
CD3DP04234 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.26□□□□□ -0.29
CD3DP04234 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
CD3DP04234 AC113367.3-201ENST00000508316 1912 ntBASIC13.26□□□□□ -0.29
CD3DP04234 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.26□□□□□ -0.29
CD3DP04234 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.26□□□□□ -0.29
CD3DP04234 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CD3DP04234 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.26□□□□□ -0.29
CD3DP04234 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.26□□□□□ -0.29
CD3DP04234 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.26□□□□□ -0.29
CD3DP04234 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.26□□□□□ -0.29
CD3DP04234 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.26□□□□□ -0.29
CD3DP04234 AC105339.3-201ENST00000560043 636 ntBASIC13.26□□□□□ -0.29
CD3DP04234 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.26□□□□□ -0.29
CD3DP04234 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.26□□□□□ -0.29
CD3DP04234 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.26□□□□□ -0.29
CD3DP04234 AP002414.3-201ENST00000589352 1468 ntBASIC13.26□□□□□ -0.29
CD3DP04234 CLEC4GP1-201ENST00000596555 870 ntBASIC13.26□□□□□ -0.29
CD3DP04234 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
CD3DP04234 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.26□□□□□ -0.29
CD3DP04234 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CD3DP04234 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CD3DP04234 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 AC126335.2-201ENST00000623362 4637 ntBASIC13.25□□□□□ -0.29
CD3DP04234 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CD3DP04234 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.25□□□□□ -0.29
CD3DP04234 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.25□□□□□ -0.29
CD3DP04234 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CD3DP04234 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
CD3DP04234 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.25□□□□□ -0.29
CD3DP04234 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.25□□□□□ -0.29
CD3DP04234 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.25□□□□□ -0.29
CD3DP04234 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.25□□□□□ -0.29
CD3DP04234 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.25□□□□□ -0.29
CD3DP04234 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 SAPCD2P3-201ENST00000455031 850 ntBASIC13.25□□□□□ -0.29
CD3DP04234 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.25□□□□□ -0.29
CD3DP04234 MOK-208ENST00000519058 917 ntTSL 2 BASIC13.25□□□□□ -0.29
CD3DP04234 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CD3DP04234 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.25□□□□□ -0.29
CD3DP04234 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms