Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
APOC1P02654 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
APOC1P02654 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.86□□□□□ -0.19
APOC1P02654 ALG1L8P-201ENST00000533887 760 ntBASIC13.86□□□□□ -0.19
APOC1P02654 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.86□□□□□ -0.19
APOC1P02654 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.86□□□□□ -0.19
APOC1P02654 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.86□□□□□ -0.19
APOC1P02654 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.86□□□□□ -0.19
APOC1P02654 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 AC018529.1-201ENST00000613063 361 ntBASIC13.86□□□□□ -0.19
APOC1P02654 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.86□□□□□ -0.19
APOC1P02654 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
APOC1P02654 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.86□□□□□ -0.19
APOC1P02654 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOC1P02654 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
APOC1P02654 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
APOC1P02654 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
APOC1P02654 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.86□□□□□ -0.19
APOC1P02654 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
APOC1P02654 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
APOC1P02654 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 AL035456.1-201ENST00000456064 1369 ntBASIC13.85□□□□□ -0.19
APOC1P02654 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
APOC1P02654 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.85□□□□□ -0.19
APOC1P02654 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.85□□□□□ -0.19
APOC1P02654 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.85□□□□□ -0.19
APOC1P02654 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 ALG1L5P-201ENST00000482043 771 ntBASIC13.85□□□□□ -0.19
APOC1P02654 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.85□□□□□ -0.19
APOC1P02654 YBX1P5-201ENST00000509441 847 ntBASIC13.85□□□□□ -0.19
APOC1P02654 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.85□□□□□ -0.19
APOC1P02654 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.85□□□□□ -0.19
APOC1P02654 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
APOC1P02654 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.85□□□□□ -0.19
APOC1P02654 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.85□□□□□ -0.19
APOC1P02654 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 MIR4313-201ENST00000580760 101 ntBASIC13.85□□□□□ -0.19
APOC1P02654 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
APOC1P02654 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.85□□□□□ -0.19
APOC1P02654 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.85□□□□□ -0.19
APOC1P02654 AL513210.1-201ENST00000629608 234 ntBASIC13.85□□□□□ -0.19
APOC1P02654 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
APOC1P02654 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
APOC1P02654 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
APOC1P02654 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 AC026748.1-201ENST00000624349 3251 ntBASIC13.85□□□□□ -0.19
APOC1P02654 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
APOC1P02654 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.85□□□□□ -0.19
APOC1P02654 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
APOC1P02654 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.85□□□□□ -0.19
APOC1P02654 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
APOC1P02654 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
APOC1P02654 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
APOC1P02654 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms