Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IFNB1P01574 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IFNB1P01574 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 AC136604.1-201ENST00000418535 575 ntBASIC16.18■□□□□ 0.18
IFNB1P01574 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.18■□□□□ 0.18
IFNB1P01574 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.18■□□□□ 0.18
IFNB1P01574 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.18■□□□□ 0.18
IFNB1P01574 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.18■□□□□ 0.18
IFNB1P01574 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.18■□□□□ 0.18
IFNB1P01574 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IFNB1P01574 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.18■□□□□ 0.18
IFNB1P01574 MIR4469-201ENST00000583919 79 ntBASIC16.18■□□□□ 0.18
IFNB1P01574 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.18■□□□□ 0.18
IFNB1P01574 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.18■□□□□ 0.18
IFNB1P01574 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.18■□□□□ 0.18
IFNB1P01574 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
IFNB1P01574 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
IFNB1P01574 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IFNB1P01574 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
IFNB1P01574 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.18■□□□□ 0.18
IFNB1P01574 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.18■□□□□ 0.18
IFNB1P01574 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
IFNB1P01574 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
IFNB1P01574 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.18■□□□□ 0.18
IFNB1P01574 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
IFNB1P01574 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 RBM39-205ENST00000397370 612 ntTSL 2 BASIC16.17■□□□□ 0.18
IFNB1P01574 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.17■□□□□ 0.18
IFNB1P01574 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.17■□□□□ 0.18
IFNB1P01574 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 AC004461.1-201ENST00000412461 403 ntBASIC16.17■□□□□ 0.18
IFNB1P01574 AL627223.1-201ENST00000416693 442 ntBASIC16.17■□□□□ 0.18
IFNB1P01574 DNAJB3-201ENST00000446806 729 ntBASIC16.17■□□□□ 0.18
IFNB1P01574 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.17■□□□□ 0.18
IFNB1P01574 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.17■□□□□ 0.18
IFNB1P01574 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.17■□□□□ 0.18
IFNB1P01574 BANF1P1-201ENST00000553684 263 ntBASIC16.17■□□□□ 0.18
IFNB1P01574 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.17■□□□□ 0.18
IFNB1P01574 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 AL671883.3-201ENST00000603274 991 ntBASIC16.17■□□□□ 0.18
IFNB1P01574 AL513210.1-201ENST00000629608 234 ntBASIC16.17■□□□□ 0.18
IFNB1P01574 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.17■□□□□ 0.18
IFNB1P01574 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
IFNB1P01574 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.17■□□□□ 0.18
IFNB1P01574 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNB1P01574 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
IFNB1P01574 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNB1P01574 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
IFNB1P01574 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNB1P01574 LINC00528-201ENST00000600723 2160 ntBASIC16.16■□□□□ 0.18
IFNB1P01574 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.16■□□□□ 0.18
IFNB1P01574 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
IFNB1P01574 ST20-AS1-201ENST00000560255 4223 ntBASIC16.16■□□□□ 0.18
IFNB1P01574 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFNB1P01574 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFNB1P01574 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
IFNB1P01574 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFNB1P01574 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
IFNB1P01574 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
IFNB1P01574 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms