Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
KDM4BO94953 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDM4BO94953 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDM4BO94953 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
KDM4BO94953 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
KDM4BO94953 PMS2P7-201ENST00000506558 1336 ntBASIC13.79□□□□□ -0.2
KDM4BO94953 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.79□□□□□ -0.2
KDM4BO94953 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDM4BO94953 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.79□□□□□ -0.2
KDM4BO94953 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDM4BO94953 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
KDM4BO94953 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.79□□□□□ -0.2
KDM4BO94953 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDM4BO94953 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.79□□□□□ -0.2
KDM4BO94953 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
KDM4BO94953 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDM4BO94953 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
KDM4BO94953 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.79□□□□□ -0.2
KDM4BO94953 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.78□□□□□ -0.2
KDM4BO94953 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.78□□□□□ -0.2
KDM4BO94953 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
KDM4BO94953 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
KDM4BO94953 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.78□□□□□ -0.2
KDM4BO94953 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
KDM4BO94953 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.78□□□□□ -0.2
KDM4BO94953 LINC01101-201ENST00000622953 1884 ntBASIC13.78□□□□□ -0.2
KDM4BO94953 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 AC134407.2-201ENST00000625089 1978 ntBASIC13.78□□□□□ -0.2
KDM4BO94953 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
KDM4BO94953 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
KDM4BO94953 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
KDM4BO94953 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KDM4BO94953 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.78□□□□□ -0.2
KDM4BO94953 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.78□□□□□ -0.2
KDM4BO94953 AC074386.1-202ENST00000463561 864 ntBASIC13.78□□□□□ -0.2
KDM4BO94953 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.78□□□□□ -0.2
KDM4BO94953 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.78□□□□□ -0.2
KDM4BO94953 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
KDM4BO94953 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.78□□□□□ -0.2
KDM4BO94953 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.78□□□□□ -0.2
KDM4BO94953 PDPK2P-202ENST00000562415 1191 ntBASIC13.78□□□□□ -0.2
KDM4BO94953 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.78□□□□□ -0.2
KDM4BO94953 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 MIR4321-201ENST00000592276 80 ntBASIC13.78□□□□□ -0.2
KDM4BO94953 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.78□□□□□ -0.2
KDM4BO94953 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
KDM4BO94953 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 IL9RP2-201ENST00000423948 1312 ntBASIC13.78□□□□□ -0.2
KDM4BO94953 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
KDM4BO94953 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
KDM4BO94953 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
KDM4BO94953 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.78□□□□□ -0.2
KDM4BO94953 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
KDM4BO94953 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KDM4BO94953 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.78□□□□□ -0.2
KDM4BO94953 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
KDM4BO94953 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
KDM4BO94953 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
KDM4BO94953 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
KDM4BO94953 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
KDM4BO94953 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
KDM4BO94953 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.77□□□□□ -0.21
KDM4BO94953 AC002056.1-201ENST00000395613 760 ntBASIC13.77□□□□□ -0.21
KDM4BO94953 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KDM4BO94953 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms