Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CDKL5O76039 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKL5O76039 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.11■□□□□ 0.49
CDKL5O76039 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKL5O76039 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.11■□□□□ 0.49
CDKL5O76039 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKL5O76039 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.11■□□□□ 0.49
CDKL5O76039 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
CDKL5O76039 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
CDKL5O76039 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKL5O76039 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
CDKL5O76039 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDKL5O76039 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDKL5O76039 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
CDKL5O76039 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.11■□□□□ 0.49
CDKL5O76039 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
CDKL5O76039 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.11■□□□□ 0.49
CDKL5O76039 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDKL5O76039 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDKL5O76039 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.1■□□□□ 0.49
CDKL5O76039 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.1■□□□□ 0.49
CDKL5O76039 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL5O76039 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.1■□□□□ 0.49
CDKL5O76039 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDKL5O76039 MEIS3P1-201ENST00000495167 958 ntBASIC18.1■□□□□ 0.49
CDKL5O76039 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.1■□□□□ 0.49
CDKL5O76039 AC135586.1-201ENST00000539323 574 ntBASIC18.1■□□□□ 0.49
CDKL5O76039 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL5O76039 AC000095.1-201ENST00000603208 874 ntBASIC18.1■□□□□ 0.49
CDKL5O76039 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.1■□□□□ 0.49
CDKL5O76039 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CDKL5O76039 AL645728.2-202ENST00000641679 227 ntBASIC18.1■□□□□ 0.49
CDKL5O76039 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CDKL5O76039 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC18.1■□□□□ 0.49
CDKL5O76039 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDKL5O76039 DBET-201ENST00000630918 3363 ntBASIC18.1■□□□□ 0.49
CDKL5O76039 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL5O76039 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CDKL5O76039 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL5O76039 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CDKL5O76039 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL5O76039 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL5O76039 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL5O76039 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL5O76039 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CDKL5O76039 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL5O76039 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL5O76039 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CDKL5O76039 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.09■□□□□ 0.49
CDKL5O76039 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL5O76039 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL5O76039 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.09■□□□□ 0.49
CDKL5O76039 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.09■□□□□ 0.49
CDKL5O76039 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL5O76039 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.09■□□□□ 0.49
CDKL5O76039 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.09■□□□□ 0.49
CDKL5O76039 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.09■□□□□ 0.49
CDKL5O76039 AC093214.1-201ENST00000511688 1107 ntBASIC18.09■□□□□ 0.49
CDKL5O76039 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL5O76039 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CDKL5O76039 AL390955.2-201ENST00000603032 514 ntBASIC18.09■□□□□ 0.49
CDKL5O76039 AC025181.2-201ENST00000606994 802 ntBASIC18.09■□□□□ 0.49
CDKL5O76039 PCDHA3-202ENST00000532566 4594 ntBASIC18.09■□□□□ 0.49
CDKL5O76039 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL5O76039 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.09■□□□□ 0.49
CDKL5O76039 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL5O76039 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CDKL5O76039 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms