Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
LDB2O43679 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
LDB2O43679 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LDB2O43679 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.55■□□□□ 0.08
LDB2O43679 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.55■□□□□ 0.08
LDB2O43679 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.55■□□□□ 0.08
LDB2O43679 GHSR-202ENST00000427970 912 ntBASIC15.55■□□□□ 0.08
LDB2O43679 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.55■□□□□ 0.08
LDB2O43679 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.55■□□□□ 0.08
LDB2O43679 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.55■□□□□ 0.08
LDB2O43679 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.55■□□□□ 0.08
LDB2O43679 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.55■□□□□ 0.08
LDB2O43679 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.55■□□□□ 0.08
LDB2O43679 MIR4745-201ENST00000577608 62 ntBASIC15.55■□□□□ 0.08
LDB2O43679 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC15.55■□□□□ 0.08
LDB2O43679 AL645728.2-202ENST00000641679 227 ntBASIC15.55■□□□□ 0.08
LDB2O43679 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LDB2O43679 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LDB2O43679 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LDB2O43679 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
LDB2O43679 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.55■□□□□ 0.08
LDB2O43679 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
LDB2O43679 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
LDB2O43679 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.55■□□□□ 0.08
LDB2O43679 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
LDB2O43679 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.54■□□□□ 0.08
LDB2O43679 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.54■□□□□ 0.08
LDB2O43679 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.54■□□□□ 0.08
LDB2O43679 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.54■□□□□ 0.08
LDB2O43679 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.54■□□□□ 0.08
LDB2O43679 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.54■□□□□ 0.08
LDB2O43679 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.54■□□□□ 0.08
LDB2O43679 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.54■□□□□ 0.08
LDB2O43679 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.54■□□□□ 0.08
LDB2O43679 DOC2GP-202ENST00000514950 1163 ntBASIC15.54■□□□□ 0.08
LDB2O43679 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.54■□□□□ 0.08
LDB2O43679 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.54■□□□□ 0.08
LDB2O43679 AC023310.3-201ENST00000557027 670 ntBASIC15.54■□□□□ 0.08
LDB2O43679 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.54■□□□□ 0.08
LDB2O43679 AC100756.1-201ENST00000562736 682 ntBASIC15.54■□□□□ 0.08
LDB2O43679 RARRES2P5-201ENST00000564013 466 ntBASIC15.54■□□□□ 0.08
LDB2O43679 AC138749.3-201ENST00000567691 622 ntBASIC15.54■□□□□ 0.08
LDB2O43679 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.54■□□□□ 0.08
LDB2O43679 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.54■□□□□ 0.08
LDB2O43679 AC116165.1-201ENST00000611806 668 ntBASIC15.54■□□□□ 0.08
LDB2O43679 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.54■□□□□ 0.08
LDB2O43679 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.54■□□□□ 0.08
LDB2O43679 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.54■□□□□ 0.08
LDB2O43679 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.54■□□□□ 0.08
LDB2O43679 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.54■□□□□ 0.08
LDB2O43679 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LDB2O43679 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
LDB2O43679 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
LDB2O43679 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.54■□□□□ 0.08
LDB2O43679 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
LDB2O43679 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
LDB2O43679 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDB2O43679 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDB2O43679 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LDB2O43679 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LDB2O43679 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LDB2O43679 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDB2O43679 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDB2O43679 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDB2O43679 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LDB2O43679 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDB2O43679 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LDB2O43679 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LDB2O43679 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.53■□□□□ 0.08
LDB2O43679 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LDB2O43679 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.53■□□□□ 0.08
LDB2O43679 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms