Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.15■□□□□ 0.18
MSI1O43347 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.15■□□□□ 0.18
MSI1O43347 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
MSI1O43347 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
MSI1O43347 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
MSI1O43347 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.14■□□□□ 0.18
MSI1O43347 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
MSI1O43347 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.14■□□□□ 0.17
MSI1O43347 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.14■□□□□ 0.17
MSI1O43347 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.14■□□□□ 0.17
MSI1O43347 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.14■□□□□ 0.17
MSI1O43347 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.14■□□□□ 0.17
MSI1O43347 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.14■□□□□ 0.17
MSI1O43347 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.14■□□□□ 0.17
MSI1O43347 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.14■□□□□ 0.17
MSI1O43347 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.14■□□□□ 0.17
MSI1O43347 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
MSI1O43347 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.14■□□□□ 0.17
MSI1O43347 AC011495.1-201ENST00000498085 584 ntBASIC16.14■□□□□ 0.17
MSI1O43347 AC026410.3-201ENST00000514280 936 ntBASIC16.14■□□□□ 0.17
MSI1O43347 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.14■□□□□ 0.17
MSI1O43347 AC239800.4-201ENST00000603712 296 ntBASIC16.14■□□□□ 0.17
MSI1O43347 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.14■□□□□ 0.17
MSI1O43347 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
MSI1O43347 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.14■□□□□ 0.17
MSI1O43347 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 FER1L4-210ENST00000615531 5998 ntBASIC16.14■□□□□ 0.17
MSI1O43347 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.14■□□□□ 0.17
MSI1O43347 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
MSI1O43347 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
MSI1O43347 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.13■□□□□ 0.17
MSI1O43347 AC105917.1-201ENST00000506637 2539 ntBASIC16.13■□□□□ 0.17
MSI1O43347 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 KRT8P22-201ENST00000562317 1415 ntBASIC16.13■□□□□ 0.17
MSI1O43347 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
MSI1O43347 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.13■□□□□ 0.17
MSI1O43347 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 AL136379.1-201ENST00000623471 2642 ntBASIC16.13■□□□□ 0.17
MSI1O43347 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
MSI1O43347 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
MSI1O43347 SOCS2P1-201ENST00000417727 557 ntBASIC16.13■□□□□ 0.17
MSI1O43347 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.13■□□□□ 0.17
MSI1O43347 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.13■□□□□ 0.17
MSI1O43347 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.13■□□□□ 0.17
MSI1O43347 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.13■□□□□ 0.17
MSI1O43347 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.13■□□□□ 0.17
MSI1O43347 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.13■□□□□ 0.17
MSI1O43347 CR383656.12-201ENST00000549567 513 ntBASIC16.13■□□□□ 0.17
MSI1O43347 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
MSI1O43347 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
MSI1O43347 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
MSI1O43347 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.13■□□□□ 0.17
MSI1O43347 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.13■□□□□ 0.17
MSI1O43347 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.13■□□□□ 0.17
MSI1O43347 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.13■□□□□ 0.17
MSI1O43347 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.13■□□□□ 0.17
MSI1O43347 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.13■□□□□ 0.17
MSI1O43347 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.13■□□□□ 0.17
MSI1O43347 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 AC063926.2-201ENST00000623766 1308 ntBASIC16.13■□□□□ 0.17
MSI1O43347 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
MSI1O43347 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
MSI1O43347 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSI1O43347 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms