Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLOCKO15516 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.89□□□□□ -0.03
CLOCKO15516 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.89□□□□□ -0.03
CLOCKO15516 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CLOCKO15516 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.89□□□□□ -0.03
CLOCKO15516 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CLOCKO15516 AC041040.2-201ENST00000622926 2899 ntBASIC14.89□□□□□ -0.03
CLOCKO15516 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLOCKO15516 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.89□□□□□ -0.03
CLOCKO15516 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.89□□□□□ -0.03
CLOCKO15516 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.89□□□□□ -0.03
CLOCKO15516 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
CLOCKO15516 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CLOCKO15516 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 HMGA1P7-201ENST00000406908 502 ntBASIC14.89□□□□□ -0.03
CLOCKO15516 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.89□□□□□ -0.03
CLOCKO15516 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.89□□□□□ -0.03
CLOCKO15516 AC005829.1-201ENST00000570002 483 ntBASIC14.89□□□□□ -0.03
CLOCKO15516 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.89□□□□□ -0.03
CLOCKO15516 AL596442.2-201ENST00000610240 980 ntBASIC14.89□□□□□ -0.03
CLOCKO15516 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLOCKO15516 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 PTENP1-202ENST00000532280 3996 ntBASIC14.89□□□□□ -0.03
CLOCKO15516 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLOCKO15516 AC127383.1-201ENST00000444697 1800 ntBASIC14.89□□□□□ -0.03
CLOCKO15516 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.89□□□□□ -0.03
CLOCKO15516 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 BCAR1-209ENST00000546196 1340 ntBASIC14.89□□□□□ -0.03
CLOCKO15516 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.89□□□□□ -0.03
CLOCKO15516 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.89□□□□□ -0.03
CLOCKO15516 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLOCKO15516 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.88□□□□□ -0.03
CLOCKO15516 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CLOCKO15516 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
CLOCKO15516 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.88□□□□□ -0.03
CLOCKO15516 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CLOCKO15516 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 MCCD1P2-201ENST00000423228 335 ntBASIC14.88□□□□□ -0.03
CLOCKO15516 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.88□□□□□ -0.03
CLOCKO15516 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.88□□□□□ -0.03
CLOCKO15516 AP001160.2-201ENST00000596071 487 ntBASIC14.88□□□□□ -0.03
CLOCKO15516 AL078644.1-201ENST00000609881 752 ntBASIC14.88□□□□□ -0.03
CLOCKO15516 AC010507.1-201ENST00000633895 436 ntBASIC14.88□□□□□ -0.03
CLOCKO15516 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
CLOCKO15516 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLOCKO15516 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.88□□□□□ -0.03
CLOCKO15516 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.88□□□□□ -0.03
CLOCKO15516 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.88□□□□□ -0.03
CLOCKO15516 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms