Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 AC009093.7-201ENST00000623853 1223 ntBASIC12.53□□□□□ -0.4
UPK2O00526 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.53□□□□□ -0.4
UPK2O00526 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC12.53□□□□□ -0.4
UPK2O00526 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.53□□□□□ -0.4
UPK2O00526 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC12.53□□□□□ -0.4
UPK2O00526 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
UPK2O00526 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
UPK2O00526 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
UPK2O00526 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UPK2O00526 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UPK2O00526 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
UPK2O00526 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.52□□□□□ -0.4
UPK2O00526 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UPK2O00526 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
UPK2O00526 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
UPK2O00526 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
UPK2O00526 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
UPK2O00526 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
UPK2O00526 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UPK2O00526 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
UPK2O00526 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
UPK2O00526 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
UPK2O00526 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
UPK2O00526 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.41
UPK2O00526 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
UPK2O00526 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK2O00526 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
UPK2O00526 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK2O00526 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK2O00526 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK2O00526 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.52□□□□□ -0.41
UPK2O00526 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK2O00526 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK2O00526 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK2O00526 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.52□□□□□ -0.41
UPK2O00526 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC12.52□□□□□ -0.41
UPK2O00526 MIR6080-201ENST00000617359 66 ntBASIC12.52□□□□□ -0.41
UPK2O00526 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.52□□□□□ -0.41
UPK2O00526 MIR6069-201ENST00000620069 79 ntBASIC12.52□□□□□ -0.41
UPK2O00526 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
UPK2O00526 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.52□□□□□ -0.41
UPK2O00526 AC007292.2-201ENST00000593524 1812 ntBASIC12.52□□□□□ -0.41
UPK2O00526 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
UPK2O00526 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
UPK2O00526 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
UPK2O00526 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC12.52□□□□□ -0.41
UPK2O00526 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC12.52□□□□□ -0.41
UPK2O00526 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.52□□□□□ -0.41
UPK2O00526 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.52□□□□□ -0.41
UPK2O00526 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
UPK2O00526 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.52□□□□□ -0.41
UPK2O00526 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK2O00526 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.51□□□□□ -0.41
UPK2O00526 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.51□□□□□ -0.41
UPK2O00526 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
UPK2O00526 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms