Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 FER1L4-210ENST00000615531 5998 ntBASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TMX2-CTNND1H3BSU7 Z97205.2-201ENST00000564697 1639 ntBASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 CLK3P2-201ENST00000427566 1453 ntBASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 AL589987.1-201ENST00000453380 819 ntBASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 AC092552.1-201ENST00000547243 906 ntBASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 AC036164.1-201ENST00000570544 333 ntBASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 AC133552.6-201ENST00000613406 534 ntBASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 WFDC1-204ENST00000613603 549 ntBASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.35■□□□□ 0.05
TMX2-CTNND1H3BSU7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TMX2-CTNND1H3BSU7 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms