Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NPIPA2E9PIF3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 PAUPAR-201ENST00000630360 2965 ntBASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 KRT18P64-201ENST00000434946 1219 ntBASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 AC106886.1-201ENST00000568660 600 ntBASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 AC133539.2-201ENST00000604757 467 ntBASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.21□□□□□ -0.13
NPIPA2E9PIF3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.21□□□□□ -0.14
NPIPA2E9PIF3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
NPIPA2E9PIF3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPA2E9PIF3 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
NPIPA2E9PIF3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
NPIPA2E9PIF3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.21□□□□□ -0.14
NPIPA2E9PIF3 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
NPIPA2E9PIF3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms