Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 CICP17-201ENST00000418553 2377 ntBASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TCRBV3S1A0A5B6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 AC089987.1-201ENST00000551654 2209 ntBASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
TCRBV3S1A0A5B6 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 AL139010.1-201ENST00000454878 894 ntBASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 AC007064.4-201ENST00000637740 555 ntBASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.58□□□□□ -0.08
TCRBV3S1A0A5B6 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 AL161772.1-201ENST00000610494 4412 ntBASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TCRBV3S1A0A5B6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 185.5 ms