Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 TFAMP1-201ENST00000412727 736 ntBASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 RN7SL589P-201ENST00000481268 310 ntBASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC008267.7-201ENST00000624570 1194 ntBASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 C18orf15-201ENST00000623680 2534 ntBASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC092127.1-201ENST00000567093 3455 ntBASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
RNF103-CHMP3A0A140T963 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 MIR940-201ENST00000401276 94 ntBASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 FAM86C2P-203ENST00000528684 1004 ntBASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC243562.2-201ENST00000561247 970 ntBASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC061975.2-201ENST00000581722 295 ntBASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AC112693.3-201ENST00000624819 1983 ntBASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AL390755.1-201ENST00000623716 2027 ntBASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AGAP7P-201ENST00000582299 2062 ntBASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 AGAP14-201ENST00000624701 2060 ntBASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
RNF103-CHMP3A0A140T963 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RNF103-CHMP3A0A140T963 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RNF103-CHMP3A0A140T963 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
RNF103-CHMP3A0A140T963 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RNF103-CHMP3A0A140T963 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RNF103-CHMP3A0A140T963 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.09■□□□□ 0.01
RNF103-CHMP3A0A140T963 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.09■□□□□ 0.01
RNF103-CHMP3A0A140T963 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms