Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYP46A1Q9Y6A2 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CYP46A1Q9Y6A2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CYP46A1Q9Y6A2 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.51■□□□□ 0.55
CYP46A1Q9Y6A2 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 AC015922.1-201ENST00000421102 1152 ntBASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 AC015911.4-201ENST00000588022 1070 ntBASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 MROH4P-201ENST00000431302 1578 ntBASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CYP46A1Q9Y6A2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 AL133267.1-201ENST00000398220 340 ntBASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 AC107890.1-201ENST00000422478 521 ntBASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 AC027369.6-201ENST00000525520 931 ntBASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 AC140878.1-201ENST00000565277 250 ntBASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 AP001160.2-201ENST00000596071 487 ntBASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 AC074044.1-201ENST00000609673 707 ntBASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 AC023511.2-201ENST00000618803 211 ntBASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 AL109936.8-201ENST00000641772 604 ntBASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CYP46A1Q9Y6A2 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYP46A1Q9Y6A2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CYP46A1Q9Y6A2 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYP46A1Q9Y6A2 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYP46A1Q9Y6A2 LINC00528-201ENST00000600723 2160 ntBASIC18.48■□□□□ 0.55
CYP46A1Q9Y6A2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.48■□□□□ 0.55
CYP46A1Q9Y6A2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYP46A1Q9Y6A2 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYP46A1Q9Y6A2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CYP46A1Q9Y6A2 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms