Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC068587.6-202ENST00000641839 5619 ntBASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 AC084364.1-201ENST00000551967 1556 ntBASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 AC098614.1-201ENST00000368528 745 ntBASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 DGCR5-201ENST00000399539 862 ntBASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 AC112492.5-201ENST00000421897 457 ntBASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 AC000095.1-201ENST00000603208 874 ntBASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 AL162274.1-201ENST00000617191 1098 ntBASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 AL133338.1-201ENST00000565695 1517 ntBASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RAI2Q9Y5P3 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 TMBIM7P-203ENST00000641617 1718 ntBASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 AL353779.1-201ENST00000434793 351 ntBASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 RN7SL399P-201ENST00000471648 279 ntBASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 AC140912.1-201ENST00000577171 1054 ntBASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 AC099568.2-201ENST00000609194 695 ntBASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 AC068587.10-201ENST00000641210 219 ntBASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAI2Q9Y5P3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RAI2Q9Y5P3 FAM86LP-201ENST00000478302 853 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms