Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHGB1Q9Y5G3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 AC067750.1-201ENST00000608826 6545 ntBASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 RPS8P6-201ENST00000426177 609 ntBASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 RPS2P1-201ENST00000434010 821 ntBASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 PRSS29P-201ENST00000440800 595 ntBASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 AL513480.1-201ENST00000451731 511 ntBASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 OR7E47P-204ENST00000575924 449 ntBASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 MIR4313-201ENST00000580760 101 ntBASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 LINC02084-201ENST00000606069 1096 ntBASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 AC055717.3-201ENST00000622967 595 ntBASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 AC004790.2-201ENST00000623588 572 ntBASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 AC116407.3-201ENST00000623905 1129 ntBASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 AL589702.1-201ENST00000641229 1509 ntBASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHGB1Q9Y5G3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 WASH3P-207ENST00000560956 1394 ntBASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 FO538757.1-201ENST00000623083 1397 ntBASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 RPS2P28-201ENST00000314255 741 ntBASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.34□□□□□ -0.11
PCDHGB1Q9Y5G3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms