Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
PCDHGB6Q9Y5F9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
PCDHGB6Q9Y5F9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
PCDHGB6Q9Y5F9 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB6Q9Y5F9 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB6Q9Y5F9 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB6Q9Y5F9 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB6Q9Y5F9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB6Q9Y5F9 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
PCDHGB6Q9Y5F9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.82□□□□□ -0.04
PCDHGB6Q9Y5F9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 PRAL-201ENST00000624952 3286 ntBASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 AP005018.1-201ENST00000525475 301 ntBASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 AC010336.2-201ENST00000564226 506 ntBASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 TP53TG3HP-202ENST00000569755 579 ntBASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 MIR600HG-201ENST00000449175 5984 ntBASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB6Q9Y5F9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 AC006486.2-201ENST00000624246 2199 ntBASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 AC087499.6-201ENST00000411576 835 ntBASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 NME2P1-201ENST00000426182 414 ntBASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 DFFBP1-201ENST00000433250 979 ntBASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 AC114501.2-201ENST00000439631 535 ntBASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 SDHAP3-202ENST00000515467 728 ntBASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 AC135586.1-201ENST00000539323 574 ntBASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 AL596325.1-201ENST00000563991 1082 ntBASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 MIR4321-201ENST00000592276 80 ntBASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.8□□□□□ -0.04
PCDHGB6Q9Y5F9 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms