Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 CTBP2P3-201ENST00000585629 1255 ntBASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 AC025181.2-201ENST00000606994 802 ntBASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PCDHGC4Q9Y5F7 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGC4Q9Y5F7 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.1
PCDHGC4Q9Y5F7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PCDHGC4Q9Y5F7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 COX20P2-201ENST00000452636 358 ntBASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 AC092552.1-201ENST00000547243 906 ntBASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 TMBIM7P-203ENST00000641617 1718 ntBASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
PCDHGC4Q9Y5F7 TSPY26P-202ENST00000565928 3884 ntBASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.69■□□□□ 0.1
PCDHGC4Q9Y5F7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms