Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB7Q9Y5E2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB7Q9Y5E2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDHB7Q9Y5E2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 RPSAP36-202ENST00000494591 1261 ntBASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 AC244452.3-201ENST00000636814 210 ntBASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDHB7Q9Y5E2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 AL139094.1-201ENST00000405549 1188 ntBASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 AC005695.3-201ENST00000614522 232 ntBASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 AC007787.1-201ENST00000588095 1583 ntBASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDHB7Q9Y5E2 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 AC022188.1-201ENST00000620960 1664 ntBASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 FER1L4-210ENST00000615531 5998 ntBASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PCDHB7Q9Y5E2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms