Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.49□□□□□ -0.57
HHLA3Q9XRX5 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 AC009090.5-201ENST00000624886 2285 ntBASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 AL592309.1-201ENST00000443127 649 ntBASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 AC092865.5-201ENST00000545435 363 ntBASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 UXT-AS1-201ENST00000590504 1525 ntBASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 AC090616.6-203ENST00000579186 1945 ntBASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 AC112693.3-201ENST00000624819 1983 ntBASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
HHLA3Q9XRX5 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 MROH4P-201ENST00000431302 1578 ntBASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 ALG1L5P-201ENST00000482043 771 ntBASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.47□□□□□ -0.57
HHLA3Q9XRX5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms