Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 CROCCP4-201ENST00000457096 498 ntBASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 SLC25A47P1-201ENST00000531577 414 ntBASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 TDH-203ENST00000531764 1110 ntBASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 RAB43P1-201ENST00000561790 589 ntBASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 AL008721.1-201ENST00000609964 604 ntBASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 HADH-212ENST00000638621 741 ntTSL 5 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 PPT1-215ENST00000641471 2368 ntBASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.9■□□□□ 0.62
HMG20BQ9P0W2 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
HMG20BQ9P0W2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.89■□□□□ 0.62
HMG20BQ9P0W2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
HMG20BQ9P0W2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HMG20BQ9P0W2 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.89■□□□□ 0.62
HMG20BQ9P0W2 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 AC136621.1-201ENST00000624017 2304 ntBASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 AC025181.2-201ENST00000606994 802 ntBASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.89■□□□□ 0.61
HMG20BQ9P0W2 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 AC233724.13-201ENST00000598383 410 ntBASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC18.88■□□□□ 0.61
HMG20BQ9P0W2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms