Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 AKAP8P1-201ENST00000434743 1349 ntBASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 AC104109.2-201ENST00000602919 1418 ntBASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 FAM86C2P-203ENST00000528684 1004 ntBASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 AC073389.1-201ENST00000595595 795 ntBASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 AC064836.3-201ENST00000607928 673 ntBASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 AC041040.2-201ENST00000622926 2899 ntBASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
PCDHB16Q9NRJ7 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 AC004987.2-201ENST00000395959 1148 ntBASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 RNA5SP416-201ENST00000516838 111 ntBASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 RARRES2P8-201ENST00000566335 367 ntBASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 AC027601.4-201ENST00000611259 610 ntBASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 AL023775.1-201ENST00000454907 1746 ntBASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PCDHB16Q9NRJ7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms