Protein–RNA interactions for Protein: Q9H6J7

C11orf49, UPF0705 protein C11orf49, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49Q9H6J7 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 AC009955.4-201ENST00000597192 544 ntBASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
C11orf49Q9H6J7 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 AC022188.1-201ENST00000620960 1664 ntBASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 MIR648-201ENST00000385046 94 ntBASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 DNM1P30-201ENST00000563586 452 ntBASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 AL031713.1-201ENST00000564813 661 ntBASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 AL358472.3-201ENST00000608147 415 ntBASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 AC242376.2-201ENST00000619355 883 ntBASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 AC055811.4-201ENST00000624039 1754 ntBASIC16.82■□□□□ 0.28
C11orf49Q9H6J7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 AC009779.1-201ENST00000551138 283 ntBASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 AC141586.1-203ENST00000567242 366 ntBASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf49Q9H6J7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms