Protein–RNA interactions for Protein: Q9BY60

GABARAPL3, Gamma-aminobutyric acid receptor-associated protein-like 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL3Q9BY60 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 HLA-H-201ENST00000383620 1096 ntBASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 ARL16-209ENST00000573715 763 ntTSL 3 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 ARL16-211ENST00000576135 694 ntTSL 3 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 AC027307.2-201ENST00000591252 911 ntBASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 AL445228.2-201ENST00000605589 952 ntBASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
GABARAPL3Q9BY60 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 AC079776.4-201ENST00000511039 504 ntBASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 IGHV3-22-201ENST00000520721 359 ntBASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 AC112191.1-201ENST00000523689 701 ntBASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 AL773604.1-201ENST00000617417 272 ntBASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 AC012313.10-201ENST00000623509 926 ntBASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 AC116407.3-201ENST00000623905 1129 ntBASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
GABARAPL3Q9BY60 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
GABARAPL3Q9BY60 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms