Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
VGLL1Q99990 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC11.89□□□□□ -0.51
VGLL1Q99990 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
VGLL1Q99990 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC11.89□□□□□ -0.51
VGLL1Q99990 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC11.89□□□□□ -0.51
VGLL1Q99990 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 AC005089.1-201ENST00000619486 2241 ntBASIC11.89□□□□□ -0.51
VGLL1Q99990 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
VGLL1Q99990 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
VGLL1Q99990 NME2-201ENST00000393183 568 ntTSL 2 BASIC11.89□□□□□ -0.51
VGLL1Q99990 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
VGLL1Q99990 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.89□□□□□ -0.51
VGLL1Q99990 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC11.89□□□□□ -0.51
VGLL1Q99990 RPL13AP23-201ENST00000480739 586 ntBASIC11.89□□□□□ -0.51
VGLL1Q99990 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.89□□□□□ -0.51
VGLL1Q99990 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC11.89□□□□□ -0.51
VGLL1Q99990 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC11.89□□□□□ -0.51
VGLL1Q99990 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC11.89□□□□□ -0.51
VGLL1Q99990 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC11.89□□□□□ -0.51
VGLL1Q99990 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.89□□□□□ -0.51
VGLL1Q99990 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC11.89□□□□□ -0.51
VGLL1Q99990 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.89□□□□□ -0.51
VGLL1Q99990 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
VGLL1Q99990 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
VGLL1Q99990 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.89□□□□□ -0.51
VGLL1Q99990 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.89□□□□□ -0.51
VGLL1Q99990 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
VGLL1Q99990 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
VGLL1Q99990 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
VGLL1Q99990 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC11.89□□□□□ -0.51
VGLL1Q99990 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC11.89□□□□□ -0.51
VGLL1Q99990 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
VGLL1Q99990 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
VGLL1Q99990 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.88□□□□□ -0.51
VGLL1Q99990 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
VGLL1Q99990 AKAP8P1-201ENST00000434743 1349 ntBASIC11.88□□□□□ -0.51
VGLL1Q99990 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.88□□□□□ -0.51
VGLL1Q99990 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.88□□□□□ -0.51
VGLL1Q99990 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.88□□□□□ -0.51
VGLL1Q99990 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC11.88□□□□□ -0.51
VGLL1Q99990 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
VGLL1Q99990 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 GPI-205ENST00000586425 1799 ntTSL 5 BASIC11.88□□□□□ -0.51
VGLL1Q99990 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
VGLL1Q99990 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
VGLL1Q99990 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC11.88□□□□□ -0.51
VGLL1Q99990 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
VGLL1Q99990 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.88□□□□□ -0.51
VGLL1Q99990 AL645939.2-201ENST00000427340 991 ntBASIC11.88□□□□□ -0.51
VGLL1Q99990 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
VGLL1Q99990 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 PHKG1P2-201ENST00000457537 863 ntBASIC11.88□□□□□ -0.51
VGLL1Q99990 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC11.88□□□□□ -0.51
VGLL1Q99990 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC11.88□□□□□ -0.51
VGLL1Q99990 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.88□□□□□ -0.51
VGLL1Q99990 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC11.88□□□□□ -0.51
VGLL1Q99990 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 AL135744.1-201ENST00000565098 629 ntBASIC11.88□□□□□ -0.51
VGLL1Q99990 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC11.88□□□□□ -0.51
VGLL1Q99990 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.88□□□□□ -0.51
VGLL1Q99990 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.88□□□□□ -0.51
VGLL1Q99990 AC008267.7-201ENST00000624570 1194 ntBASIC11.88□□□□□ -0.51
VGLL1Q99990 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC11.88□□□□□ -0.51
VGLL1Q99990 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
VGLL1Q99990 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms