Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RAD9AQ99638 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 DPM3-202ENST00000368399 517 ntBASIC16.47■□□□□ 0.23
RAD9AQ99638 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC16.47■□□□□ 0.23
RAD9AQ99638 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RAD9AQ99638 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.47■□□□□ 0.23
RAD9AQ99638 POM121L8P-201ENST00000417732 1281 ntBASIC16.47■□□□□ 0.23
RAD9AQ99638 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.47■□□□□ 0.23
RAD9AQ99638 POM121L9P-203ENST00000441984 1285 ntBASIC16.47■□□□□ 0.23
RAD9AQ99638 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.47■□□□□ 0.23
RAD9AQ99638 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RAD9AQ99638 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.47■□□□□ 0.23
RAD9AQ99638 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 AL391280.1-201ENST00000506969 1062 ntBASIC16.47■□□□□ 0.23
RAD9AQ99638 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC16.47■□□□□ 0.23
RAD9AQ99638 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.47■□□□□ 0.23
RAD9AQ99638 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.47■□□□□ 0.23
RAD9AQ99638 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
RAD9AQ99638 RN7SL574P-201ENST00000581512 297 ntBASIC16.47■□□□□ 0.23
RAD9AQ99638 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC16.47■□□□□ 0.23
RAD9AQ99638 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC16.47■□□□□ 0.23
RAD9AQ99638 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 AC022748.3-201ENST00000621828 275 ntBASIC16.47■□□□□ 0.23
RAD9AQ99638 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.47■□□□□ 0.23
RAD9AQ99638 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.47■□□□□ 0.23
RAD9AQ99638 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.47■□□□□ 0.23
RAD9AQ99638 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 AL158070.2-201ENST00000623713 1621 ntBASIC16.47■□□□□ 0.23
RAD9AQ99638 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RAD9AQ99638 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
RAD9AQ99638 AC008132.1-202ENST00000342005 1389 ntBASIC16.47■□□□□ 0.23
RAD9AQ99638 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RAD9AQ99638 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.47■□□□□ 0.23
RAD9AQ99638 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RAD9AQ99638 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.46■□□□□ 0.23
RAD9AQ99638 AC092978.1-202ENST00000637590 1327 ntBASIC16.46■□□□□ 0.23
RAD9AQ99638 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 AC092171.3-201ENST00000610122 2651 ntBASIC16.46■□□□□ 0.23
RAD9AQ99638 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.46■□□□□ 0.23
RAD9AQ99638 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.46■□□□□ 0.23
RAD9AQ99638 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 NUP210P1-202ENST00000504322 710 ntBASIC16.46■□□□□ 0.23
RAD9AQ99638 AC022616.1-201ENST00000518688 554 ntBASIC16.46■□□□□ 0.23
RAD9AQ99638 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC16.46■□□□□ 0.23
RAD9AQ99638 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.46■□□□□ 0.23
RAD9AQ99638 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
RAD9AQ99638 PRKXP1-201ENST00000561423 1122 ntBASIC16.46■□□□□ 0.23
RAD9AQ99638 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.46■□□□□ 0.23
RAD9AQ99638 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.46■□□□□ 0.23
RAD9AQ99638 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
RAD9AQ99638 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.46■□□□□ 0.23
RAD9AQ99638 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
RAD9AQ99638 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAD9AQ99638 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAD9AQ99638 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAD9AQ99638 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RAD9AQ99638 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RAD9AQ99638 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.45■□□□□ 0.22
RAD9AQ99638 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.45■□□□□ 0.22
RAD9AQ99638 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.45■□□□□ 0.22
RAD9AQ99638 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RAD9AQ99638 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RAD9AQ99638 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
RAD9AQ99638 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.45■□□□□ 0.22
RAD9AQ99638 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAD9AQ99638 EIF3FP3-201ENST00000434851 1086 ntBASIC16.45■□□□□ 0.22
RAD9AQ99638 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms