Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 STOM-203ENST00000538954 1257 ntTSL 5 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 AC239800.4-201ENST00000603712 296 ntBASIC18.44■□□□□ 0.54
NEK1Q96PY6 AC025181.2-201ENST00000606994 802 ntBASIC18.44■□□□□ 0.54
NEK1Q96PY6 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 TNRC18P2-201ENST00000417666 2714 ntBASIC18.44■□□□□ 0.54
NEK1Q96PY6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
NEK1Q96PY6 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NEK1Q96PY6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 MEIS3P1-201ENST00000495167 958 ntBASIC18.43■□□□□ 0.54
NEK1Q96PY6 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 AL096865.1-201ENST00000606796 927 ntBASIC18.43■□□□□ 0.54
NEK1Q96PY6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NEK1Q96PY6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.43■□□□□ 0.54
NEK1Q96PY6 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NEK1Q96PY6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.42■□□□□ 0.54
NEK1Q96PY6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms