Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
SNX27Q96L92 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SNX27Q96L92 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.74■□□□□ 0.27
SNX27Q96L92 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SNX27Q96L92 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SNX27Q96L92 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.74■□□□□ 0.27
SNX27Q96L92 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 AC234783.1-201ENST00000441761 496 ntBASIC16.74■□□□□ 0.27
SNX27Q96L92 AC012441.1-201ENST00000446669 685 ntBASIC16.74■□□□□ 0.27
SNX27Q96L92 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.74■□□□□ 0.27
SNX27Q96L92 BNIP3P42-201ENST00000454982 569 ntBASIC16.74■□□□□ 0.27
SNX27Q96L92 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.74■□□□□ 0.27
SNX27Q96L92 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.74■□□□□ 0.27
SNX27Q96L92 BNIP3P29-201ENST00000598302 571 ntBASIC16.74■□□□□ 0.27
SNX27Q96L92 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.74■□□□□ 0.27
SNX27Q96L92 AC011447.5-201ENST00000616168 564 ntBASIC16.74■□□□□ 0.27
SNX27Q96L92 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.74■□□□□ 0.27
SNX27Q96L92 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
SNX27Q96L92 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.74■□□□□ 0.27
SNX27Q96L92 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.74■□□□□ 0.27
SNX27Q96L92 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SNX27Q96L92 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SNX27Q96L92 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SNX27Q96L92 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SNX27Q96L92 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SNX27Q96L92 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.73■□□□□ 0.27
SNX27Q96L92 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SNX27Q96L92 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
SNX27Q96L92 ACKR1-201ENST00000368121 1240 ntBASIC16.73■□□□□ 0.27
SNX27Q96L92 AC005229.1-201ENST00000392885 409 ntBASIC16.73■□□□□ 0.27
SNX27Q96L92 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 BAATP1-201ENST00000412284 1225 ntBASIC16.73■□□□□ 0.27
SNX27Q96L92 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.73■□□□□ 0.27
SNX27Q96L92 AC022137.2-201ENST00000503482 481 ntBASIC16.73■□□□□ 0.27
SNX27Q96L92 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.73■□□□□ 0.27
SNX27Q96L92 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.73■□□□□ 0.27
SNX27Q96L92 AC016629.1-201ENST00000596579 586 ntBASIC16.73■□□□□ 0.27
SNX27Q96L92 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.73■□□□□ 0.27
SNX27Q96L92 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.73■□□□□ 0.27
SNX27Q96L92 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.73■□□□□ 0.27
SNX27Q96L92 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SNX27Q96L92 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.73■□□□□ 0.27
SNX27Q96L92 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SNX27Q96L92 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SNX27Q96L92 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.72■□□□□ 0.27
SNX27Q96L92 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.72■□□□□ 0.27
SNX27Q96L92 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms