Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.55■□□□□ 0.56
DDX11Q96FC9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
DDX11Q96FC9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 AL359881.2-201ENST00000602973 570 ntBASIC18.54■□□□□ 0.56
DDX11Q96FC9 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
DDX11Q96FC9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC18.54■□□□□ 0.56
DDX11Q96FC9 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 AZGP1P1-201ENST00000411909 902 ntBASIC18.53■□□□□ 0.56
DDX11Q96FC9 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 AP006294.1-201ENST00000415407 339 ntBASIC18.53■□□□□ 0.56
DDX11Q96FC9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 PHKG1P2-201ENST00000457537 863 ntBASIC18.53■□□□□ 0.56
DDX11Q96FC9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 CHCHD2P3-201ENST00000603038 451 ntBASIC18.53■□□□□ 0.56
DDX11Q96FC9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 AC138035.3-201ENST00000622706 2791 ntBASIC18.53■□□□□ 0.56
DDX11Q96FC9 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
DDX11Q96FC9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC18.53■□□□□ 0.56
DDX11Q96FC9 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC18.52■□□□□ 0.56
DDX11Q96FC9 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
DDX11Q96FC9 TMBIM7P-203ENST00000641617 1718 ntBASIC18.52■□□□□ 0.56
DDX11Q96FC9 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
DDX11Q96FC9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX11Q96FC9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
DDX11Q96FC9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
DDX11Q96FC9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms