Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
NCLNQ969V3 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCLNQ969V3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCLNQ969V3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCLNQ969V3 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NCLNQ969V3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.23■□□□□ 0.03
NCLNQ969V3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NCLNQ969V3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NCLNQ969V3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCLNQ969V3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NCLNQ969V3 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCLNQ969V3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NCLNQ969V3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.23■□□□□ 0.03
NCLNQ969V3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.23■□□□□ 0.03
NCLNQ969V3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
NCLNQ969V3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
NCLNQ969V3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NCLNQ969V3 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
NCLNQ969V3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.22■□□□□ 0.03
NCLNQ969V3 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.22■□□□□ 0.03
NCLNQ969V3 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.22■□□□□ 0.03
NCLNQ969V3 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NCLNQ969V3 SPDYE7P-202ENST00000420373 878 ntBASIC15.22■□□□□ 0.03
NCLNQ969V3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.22■□□□□ 0.03
NCLNQ969V3 CNN2P2-201ENST00000443536 909 ntBASIC15.22■□□□□ 0.03
NCLNQ969V3 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.22■□□□□ 0.03
NCLNQ969V3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.22■□□□□ 0.03
NCLNQ969V3 FAM86GP-201ENST00000448322 971 ntBASIC15.22■□□□□ 0.03
NCLNQ969V3 CNN2P3-201ENST00000450201 906 ntBASIC15.22■□□□□ 0.03
NCLNQ969V3 RFPL4AP1-201ENST00000530883 850 ntBASIC15.22■□□□□ 0.03
NCLNQ969V3 AC069262.1-201ENST00000539058 672 ntBASIC15.22■□□□□ 0.03
NCLNQ969V3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.22■□□□□ 0.03
NCLNQ969V3 AL136317.3-201ENST00000618497 906 ntBASIC15.22■□□□□ 0.03
NCLNQ969V3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.22■□□□□ 0.03
NCLNQ969V3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.22■□□□□ 0.03
NCLNQ969V3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.22■□□□□ 0.03
NCLNQ969V3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.22■□□□□ 0.03
NCLNQ969V3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.22■□□□□ 0.03
NCLNQ969V3 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.22■□□□□ 0.03
NCLNQ969V3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
NCLNQ969V3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 AL589702.1-201ENST00000641229 1509 ntBASIC15.22■□□□□ 0.03
NCLNQ969V3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NCLNQ969V3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.22■□□□□ 0.03
NCLNQ969V3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NCLNQ969V3 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
NCLNQ969V3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
NCLNQ969V3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
NCLNQ969V3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
NCLNQ969V3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC15.21■□□□□ 0.03
NCLNQ969V3 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NCLNQ969V3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
NCLNQ969V3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NCLNQ969V3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NCLNQ969V3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 FAM220BP-201ENST00000377689 816 ntBASIC15.21■□□□□ 0.03
NCLNQ969V3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
NCLNQ969V3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
NCLNQ969V3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.21■□□□□ 0.03
NCLNQ969V3 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.21■□□□□ 0.03
NCLNQ969V3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.21■□□□□ 0.03
NCLNQ969V3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.21■□□□□ 0.03
NCLNQ969V3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.21■□□□□ 0.03
NCLNQ969V3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.21■□□□□ 0.03
NCLNQ969V3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
NCLNQ969V3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
NCLNQ969V3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms