Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RAPGEF4Q8WZA2 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 ILF3-AS1-201ENST00000591501 1983 ntBASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 HNRNPA1P63-201ENST00000427917 963 ntBASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 AC022616.1-201ENST00000518688 554 ntBASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 AC007663.3-201ENST00000609632 465 ntBASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 AP003680.1-201ENST00000598970 3660 ntBASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
RAPGEF4Q8WZA2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC20.2■□□□□ 0.83
RAPGEF4Q8WZA2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 ELK2AP-201ENST00000392510 1007 ntBASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 POM121L8P-201ENST00000417732 1281 ntBASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 POM121L9P-203ENST00000441984 1285 ntBASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 SAMD11P1-201ENST00000571429 661 ntBASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 NDUFV2P1-201ENST00000596415 907 ntBASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 KLK11-210ENST00000600362 759 ntTSL 3 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC20.2■□□□□ 0.82
RAPGEF4Q8WZA2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 AC112504.1-201ENST00000623415 1841 ntBASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 AC073413.1-201ENST00000603927 732 ntBASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 ZACNP1-201ENST00000612259 710 ntBASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 AL645728.2-202ENST00000641679 227 ntBASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
RAPGEF4Q8WZA2 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms