Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 AC079328.2-201ENST00000561241 3354 ntBASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CASKIN1Q8WXD9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 BNIP3P13-201ENST00000599968 566 ntBASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CASKIN1Q8WXD9 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 AC002472.3-201ENST00000640124 621 ntBASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 CES3-203ENST00000543856 3178 ntTSL 2 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 RBM38-204ENST00000371219 760 ntTSL 2 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
CASKIN1Q8WXD9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 AC112693.3-201ENST00000624819 1983 ntBASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 PES1-204ENST00000402284 2144 ntTSL 5 BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 DPM3-202ENST00000368399 517 ntBASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 CDC23-208ENST00000505120 455 ntTSL 3 BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CASKIN1Q8WXD9 KRT8P29-201ENST00000420409 1371 ntBASIC23.65■■□□□ 1.38
CASKIN1Q8WXD9 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CASKIN1Q8WXD9 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CASKIN1Q8WXD9 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CASKIN1Q8WXD9 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CASKIN1Q8WXD9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC23.65■■□□□ 1.38
CASKIN1Q8WXD9 API5-202ENST00000420461 2009 ntTSL 2 BASIC23.65■■□□□ 1.38
CASKIN1Q8WXD9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CASKIN1Q8WXD9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC23.65■■□□□ 1.38
CASKIN1Q8WXD9 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CASKIN1Q8WXD9 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC23.65■■□□□ 1.38
CASKIN1Q8WXD9 SPTLC1P5-201ENST00000450718 252 ntBASIC23.65■■□□□ 1.38
CASKIN1Q8WXD9 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms