Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 SPCS2P4-201ENST00000436160 681 ntBASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AC098859.1-201ENST00000502915 1238 ntBASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 IGHV3-62-201ENST00000520057 340 ntBASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 KRT8P23-201ENST00000560090 1207 ntBASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AC010327.4-202ENST00000591484 748 ntBASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 SPTSSB-204ENST00000617024 1292 ntBASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AC007191.1-201ENST00000623179 2995 ntBASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.2□□□□□ -0.3
RTN4IP1Q8WWV3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 AL359258.3-201ENST00000622910 2331 ntBASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 FGD5P1-202ENST00000614866 2498 ntBASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 AC127383.1-201ENST00000444697 1800 ntBASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 GPX1P2-201ENST00000429271 606 ntBASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 YBX1P5-201ENST00000509441 847 ntBASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 MIR4469-201ENST00000583919 79 ntBASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms