Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 PRAL-201ENST00000624952 3286 ntBASIC14.09□□□□□ -0.15
FNDC9Q8TBE3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
FNDC9Q8TBE3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
FNDC9Q8TBE3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.09□□□□□ -0.15
FNDC9Q8TBE3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.08□□□□□ -0.15
FNDC9Q8TBE3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FNDC9Q8TBE3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.08□□□□□ -0.15
FNDC9Q8TBE3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FNDC9Q8TBE3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.15
FNDC9Q8TBE3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
FNDC9Q8TBE3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 DGCR5-201ENST00000399539 862 ntBASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 AC005034.1-201ENST00000426657 489 ntBASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 MYCLP2-201ENST00000449268 967 ntBASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 AC123567.1-201ENST00000548294 1261 ntBASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 WASH4P-201ENST00000564273 1246 ntBASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
FNDC9Q8TBE3 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 AC023824.1-201ENST00000562945 2975 ntBASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 RRP7BP-205ENST00000566851 833 ntBASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 AC036164.1-201ENST00000570544 333 ntBASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 MIR4313-201ENST00000580760 101 ntBASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 AC093726.1-201ENST00000608064 963 ntBASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 AL035252.4-201ENST00000624174 288 ntBASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FNDC9Q8TBE3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms